Streptomyces janthinus: RI060_13175
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Entry
RI060_13175 CDS
T09385
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sjn
Streptomyces janthinus
Pathway
sjn03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
RI060_13175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_13175
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
RI060_13175
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
HC2
Motif
Other DBs
NCBI-ProteinID:
WND23771
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All DBs
Position
complement(2950548..2951603)
Genome browser
AA seq
351 aa
AA seq
DB search
MLHVRSIWNGAISFGLVSIPIKLVNATESHSISFRQIHTEDGGRIRYRKFCELEDREVTQ
GEIGKGYEDADGTVIPITEEDLSSLPIPTAKTIEIVAFVPGDRIDPLQMDAAYYLQASGA
PAAKPYTLLREALKRSNKVAIAKFALRGRERLGMLRVVGEAIAMHGLLWPDEVRAPEGVA
PDTNVTVRDQELDLADALMDTLGEVDLEDLHDEYREAVEEVIAAKAAGETPRQAPEPAQG
GKVLDLMAALENSVRAARESRGEEADDHAEVKSLPPRKTARAAPKQTGGKKSTSTAKKTA
AKKTTAAKKSTAKSGQSGQSGRSGQGAKKTAAKSTAKKTTAKKSTSRKRTA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
gtgctgcacgtgagatccatctggaacggcgccatctcgttcgggctggtcagcatcccg
atcaagctggtgaacgccaccgagagccactcgatctccttccgccagatccacaccgag
gacggcggccgtatccgctaccgcaagttctgcgagctggaggaccgcgaggtcacccag
ggggagatcggcaagggctacgaggacgcggacggcacggtcatcccgatcaccgaggag
gacctgtccagcctgcccatccccacggccaagacgatcgagatcgtcgccttcgtcccc
ggcgaccggatcgacccgctccagatggacgccgcgtactacctgcaggcgagcggcgcc
ccggcggcgaagccgtacacgctgctgcgggaggcgctgaagcgcagcaacaaggtggcg
atcgcgaagttcgccctgcgcggccgggaacgcctgggcatgctccgggtggtcggcgag
gccatcgcgatgcacggtctgctgtggccggacgaggtccgtgcccccgagggcgtggcc
cccgacacgaacgtcacggtccgtgaccaggaactggacctggcggatgccctgatggac
actctgggcgaggtcgacctggaggatctccacgacgagtaccgcgaggccgtggaggag
gtcatcgccgcgaaggcggccggcgagaccccgcgccaggccccggaaccggcccagggc
ggcaaggtcctggacctgatggcggctctggagaacagcgtccgggcggcccgcgagtcg
cgcggcgaggaggccgacgaccacgccgaggtcaagtcgctcccgccacgcaagacggcc
cgcgcggcccccaagcagaccggcggcaagaagtccacgtccaccgcgaagaagacggcg
gccaagaagacgacagcggccaagaagtccacggcgaagtcggggcagtcagggcagtca
gggcggtcggggcagggtgcgaagaagacggcggcgaagagcaccgcgaagaagacgacg
gcgaagaagtcgacctcacgtaagcgcacggcctga
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