Streptomyces violaceus: RI060_13215
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Entry
RI060_13215 CDS
T09385
Name
(GenBank) penicillin-binding transpeptidase domain-containing protein
KO
K05364
penicillin-binding protein A
Organism
sjn
Streptomyces violaceus
Pathway
sjn00550
Peptidoglycan biosynthesis
sjn01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RI060_13215
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sjn01011
]
RI060_13215
Peptidoglycan biosynthesis and degradation proteins [BR:
sjn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RI060_13215
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer_2
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
WND18234
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Position
2958226..2959704
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AA seq
492 aa
AA seq
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MTRYIRHAGLFCALLLVALLLNAARVQVVQAPAYDGNPANRRAEIARYERPRGDILVGGR
PVTGSQDTREHLRYERTYADGPMYAPVTGFASQLYGTTLLEHTEDGVLSGSDPMLAPFPL
WSDFTRARNAGGHVVTTLTPAAQRAAHKGLAGRKGAVAALEPSTGRILALVSAPSYDPQP
LSGNGAAAARAWARLNADRDRPMLNRAVRQTYPPGSTFKIVTLAAALDAGVVTDLDEPTD
SPDPYRLPSTRTRLSNDSKGCADASVGEAFVHSCNTVFAQLGVEAGVPAMTATARAFGFN
DTALRIPFSVARSTFDTSLDKAQLALSSIGQYNTRATPLQMAMVAAAVANGGQVREPYLV
ERTLRPGGSTLATAGSRAIRQAMTPATAARLRGLMRGVVKDGTGRNAAIRGAKVGGKTGT
AQHGIGNSGTPYAWFVSWAQGDRDLQPPVAVAVVVEDADADRGDISGGGDAAPIARAVME
AVLNSRERLPGS
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgacgcggtacatccggcacgccggcctcttctgcgccctgctgctggtggccctgctg
ctgaacgccgcccgcgtccaggtcgtccaggccccggcgtacgacggcaaccccgccaac
cgacgcgcggaaatcgcccgttacgagcggccgcgcggcgacatcctggtcggcggccgg
cccgtcaccggctcgcaggacacccgtgagcacctgcgctacgagcggacctacgccgac
ggcccgatgtacgcgccggtcaccggcttcgcctcccagctgtacgggacgacgcttctg
gagcacaccgaggacggcgtcctgtccggctcggacccgatgctcgcgccgttcccgctg
tggagcgacttcacgcgtgcgcgaaacgccggcggacacgtcgtgacgacgctcaccccg
gccgcacaacgggcggcgcacaagggactcgccgggcgcaagggcgcggtggcggccctg
gagccgtcgaccggccggatcctggccctggtgtccgccccgtcctacgatccccagccg
ctgtccgggaacggtgcggcggcggcccgggcctgggcgcggctgaacgccgaccgggac
cggccgatgctcaaccgggcggtacggcagacgtatccgccgggttcgaccttcaagatc
gtcaccttggccgcagcgctggacgccggcgtggtcacggacctcgacgagccgaccgac
tcccccgatccctaccggctgcccagtacgaggacgcgcctgtcgaacgattcgaagggc
tgcgcggacgcctccgtgggcgaggcgttcgtccactcctgcaacacggtgttcgcccag
ctgggcgtggaggcgggcgtgccggccatgacggccacggcccgggccttcggattcaac
gacacggcgctcagaatccccttctcggtggcgcggtccaccttcgacacctcgctcgac
aaggcacagctcgcgctgtcgtcgatcggccagtacaacacccgcgccaccccgctgcag
atggcgatggtggcggcggccgtggcgaacggcggacaggtacgggagccctacctggtg
gagcgcacgttgcggccgggcggcagcaccctcgcgaccgccggctcgcgcgcgatccgc
caggcgatgacccccgcgaccgccgcgcgactgcgcgggctgatgcggggcgtggtcaag
gacggcaccggacgcaacgccgcgatccgcggtgccaaggtcggcggcaagacgggcacc
gcccagcacggcatcggcaactccggcacgccgtacgcctggttcgtctcctgggcccag
ggcgatcgtgaccttcagccgccggtggcggtcgcggtcgtcgtggaggacgcggacgcg
gatcgcggggacatcagcgggggcggcgacgcggcgccgatcgcgcgggccgtgatggag
gcggtgctgaactcccgggaacggctgcccggttcatga
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