Streptomyces janthinus: RI060_15405
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Entry
RI060_15405 CDS
T09385
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn00020
Citrate cycle (TCA cycle)
sjn00190
Oxidative phosphorylation
sjn00650
Butanoate metabolism
sjn00720
Other carbon fixation pathways
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01120
Microbial metabolism in diverse environments
sjn01200
Carbon metabolism
Module
sjn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sjn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sjn_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RI060_15405 (sdhA)
00650 Butanoate metabolism
RI060_15405 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RI060_15405 (sdhA)
00720 Other carbon fixation pathways
RI060_15405 (sdhA)
Enzymes [BR:
sjn01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RI060_15405 (sdhA)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
DAO
Thi4
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
WND18637
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All DBs
Position
3412696..3414450
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AA seq
584 aa
AA seq
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MKIHKYDTVIVGAGGAGMRAAIESTKRSRTAVLTKLYPTRSHTGAAQGGMAAALANVEED
NWEWHTFDTVKGGDYLVDQDAAEILAKEAIDSVLDLEKMGLPFNRTPNGTIDQRRFGGHS
RNHGEAPVRRSCYAADRTGHMILQTLYQNCVKEGVEFYNEFYVLDQLITEVDGVKKSAGV
VAYELATGEIHVFQAKSVVYASGGCGKFFKVTSNAHTLTGDGQAAVYRRGLPLEDMEFFQ
FHPTGIWRMGILLTEGARGEGGILRNKDGERFMEKYAPVMKDLASRDVVSRSIYTEIREG
RGCGPEGDHVYLDLTHLPPEQLDAKLPDITEFARTYLGIEPYTDPIPIQPTAHYVMGGIP
TNVEGEVLADNTTVVPGLYAAGEVACVSVHGANRLGTNSLLDINVFGKRAGIAAAEYAQT
ADFVELPENPAELVVEQVERLRDSTGTERVTAIRRELQDTMDANVMVFRTEQTIKTAVEK
IAELRERFKNVSIQDKGKRFNTDLLEAIELGNLLDLAEVMAVSALARKESRGGHYREDYP
NRDDVNFMRHTMAYREVGDDGSETVRLDYKPVVQTRYQPMERKY
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaagatccacaagtacgacaccgtcatcgtcggcgccggtggcgcgggcatgcgcgcc
gccatcgagtcgacgaagcgcagccgcaccgcggtcctgaccaagctgtaccccacccgc
tcccacacgggcgccgcgcagggcggcatggccgccgcgctggccaacgtggaggaggac
aactgggagtggcacaccttcgacacggtcaagggcggtgactacctggtcgaccaggac
gccgccgagatcctggcgaaggaggccatcgactccgtcctcgacctggagaagatgggc
ctgccgttcaaccgcaccccgaacggcaccatcgaccagcgccgcttcggcggtcacagc
cgtaaccacggcgaggccccggtccgccgctcctgctacgcggccgaccgcaccggccac
atgatcctccagacgctgtaccagaactgcgtcaaggagggcgtggagttctacaacgag
ttctacgtcctggaccagctgatcaccgaggtcgacggcgtcaagaagtcggccggtgtg
gtggcgtacgagctggcgaccggtgagatccacgtcttccaggcgaagtccgtggtctac
gcgtccggtggctgcggcaagttcttcaaggtgacgtcgaacgcgcacacgctgaccggt
gacggccaggcggcggtctaccgccgcggcctgccgctggaggacatggagttcttccag
ttccacccgaccggcatctggcgcatgggcatcctgctgacggagggcgcccgcggtgag
ggcggcatcctccgcaacaaggacggcgagcgcttcatggagaagtacgcgccggtcatg
aaggacctcgcgtcccgtgacgtcgtctcgcgctccatctacacggagatccgtgagggc
cgcggctgcggtcccgagggcgaccacgtctacctcgacctcacgcacctcccgccggag
cagctggacgcgaagctcccggacatcacggagttcgcgcgcacctacctcggcatcgag
ccctacacggacccgatcccgatccagcccacggcccactacgtgatgggcggcatcccg
acgaacgtcgagggtgaggtcctggcggacaacaccaccgtcgtcccgggcctgtacgcg
gccggcgaggtcgcctgcgtgtccgtgcacggcgcgaaccgcctcggcaccaactccctg
ctggacatcaacgtgttcggcaagcgcgcgggcatcgccgccgcggagtacgcgcagacg
gcggacttcgtcgagctgccggagaacccggcggagctcgtggtcgagcaggtggagcga
ctgcgcgactccaccggcaccgagcgtgtgacggcgatccgtcgcgaactgcaggacacc
atggacgccaacgtcatggtgttccgcaccgagcagacgatcaagacggcggtcgagaag
atcgcggaactgcgcgagcggttcaagaacgtgtcgatccaggacaagggcaagcggttc
aacacggacctgctggaggccatcgagctgggcaacctgctggacctcgccgaggtcatg
gcggtctccgcgctcgcccgcaaggagtcccgcggcggtcactaccgcgaggactacccg
aaccgcgacgacgtcaacttcatgcggcacaccatggcgtaccgcgaggtcggcgacgac
ggctccgaaaccgtccgtctcgactacaagccggtcgtccagacccgctaccagccgatg
gagcgtaagtactga
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