Streptomyces janthinus: RI060_15675
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Entry
RI060_15675 CDS
T09385
Symbol
sucD
Name
(GenBank) succinate--CoA ligase subunit alpha
KO
K01902
succinyl-CoA synthetase alpha subunit [EC:
6.2.1.5
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn00020
Citrate cycle (TCA cycle)
sjn00640
Propanoate metabolism
sjn00660
C5-Branched dibasic acid metabolism
sjn00720
Other carbon fixation pathways
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01120
Microbial metabolism in diverse environments
sjn01200
Carbon metabolism
Module
sjn_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sjn_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RI060_15675 (sucD)
00640 Propanoate metabolism
RI060_15675 (sucD)
00660 C5-Branched dibasic acid metabolism
RI060_15675 (sucD)
09102 Energy metabolism
00720 Other carbon fixation pathways
RI060_15675 (sucD)
Enzymes [BR:
sjn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
RI060_15675 (sucD)
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GFIT
Motif
Pfam:
CoA_binding
Ligase_CoA
Succ_CoA_lig
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WND18689
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All DBs
Position
complement(3472897..3473781)
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AA seq
294 aa
AA seq
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MAIFLNKDSKVIVQGMTGATGMKHTKLMLADGTNIVGGVNPRKAGTSVDIDGNDIPVFGT
VAEAIEKTGANVSVLFVPPAFAKAAVVEAIDAEIPLAVVITEGIAVHDSAAFYAYAVSQG
NKTRIIGPNCPGLITPGQSNAGIIPGDITKPGRIGLVSKSGTLTYQMMYELRDIGFSSAV
GIGGDPVIGTTHIDALAAFEADPDTDLIVMIGEIGGDAEERAAAFIKENVKKPVVGYVAG
FTAPEGKTMGHAGAIVSGSSGTAAAKKEALEAAGVKVGKTPTETAKLARAILAG
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggctatcttcctcaacaaggacagcaaggtcatcgtccagggcatgaccggtgccacg
ggcatgaagcacaccaagctcatgctggccgacggcacgaacatcgtcggtggcgtgaac
ccgcgcaaggcgggcacgtccgtcgacatcgacggcaacgacatcccggtcttcggcacg
gtcgccgaggcgatcgagaagacgggtgccaacgtatccgtcctcttcgtcccgccggcc
ttcgccaaggccgccgtcgtcgaggccatcgacgccgagatcccgctcgcggtcgtcatc
accgagggcatcgccgtccacgactctgccgcgttctacgcctacgccgtgtcccagggc
aacaagacccgcatcatcggcccgaactgccccggcctcatcaccccgggtcagtcgaac
gcaggcatcatcccgggcgacatcaccaagccgggccgcatcggtctggtctcgaagtcc
ggcacgctgacgtaccagatgatgtacgagctgcgtgacatcggcttctcctcggccgtc
ggcatcggtggcgacccggtcatcggcacgacccacatcgacgcgctcgccgcgttcgag
gccgaccccgacaccgacctgatcgtgatgatcggtgagatcggcggcgacgccgaggag
cgggccgcggccttcatcaaggagaacgtgaagaagccggtcgtcggctacgtcgcgggc
ttcaccgcgcccgagggcaagaccatgggccacgccggcgccatcgtctccggctcctcc
ggcacggccgccgcgaagaaggaggccctcgaggccgccggcgtcaaggtcggcaagacc
ccgaccgagacggcgaagctggcccgcgccatcctcgccggctga
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