Streptomyces violaceus: RI060_15730
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Entry
RI060_15730 CDS
T09385
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sjn
Streptomyces violaceus
Pathway
sjn03420
Nucleotide excision repair
sjn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RI060_15730 (pcrA)
03430 Mismatch repair
RI060_15730 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_15730 (pcrA)
Enzymes [BR:
sjn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RI060_15730 (pcrA)
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RI060_15730 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
RI060_15730 (pcrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_11
ResIII
DEAD
ATG17_like
Motif
Other DBs
NCBI-ProteinID:
WND18700
LinkDB
All DBs
Position
complement(3488896..3491376)
Genome browser
AA seq
826 aa
AA seq
DB search
MSSLFDDSFLADLQAQRGPADEPPPPPEDDHVPEPVPDDLFGGKFDAPPDRDAYYRGGAA
RPPVDAAALLEGLNDNQRAAVVHSGSPLLIVAGAGSGKTRVLTHRIAHLLAERDVHPGQI
LAITFTNKAAGEMKERVEQLVGPRANAMWVMTFHSACVRILRRESKKLGFTSSFSIYDAA
DSKRLMALVCRDLDLDPKRFPPKSFSAKISNLKNELIDEEDFAAQAADGFEKTLAQAYAM
YQSRLREANALDFDDLIMTTVNLLRAFPDVAEHYHRRFRHVLVDEYQDTNHAQYALVREL
VGTSEYPVDVPPSADDLPPAELCVVGDADQSIYAFRGATIRNILQFEEDYPDATTILLEQ
NYRSTQTILSAANAVIERNESRRPKNLWTNAGTGAQITGYVADTEHDEAQFVADEIDRLT
DAGEAKAGDVAVFYRTNAQSRVFEEIFIRVGLPYKVVGGVRFYERKEVRDVLAYLRVLAN
PEDSVPLRRILNVPKRGIGDRAEAMIDALSQREKISFPQALKRVDEAYGMAARSTNAVKR
FNTLMEDLRTVVESGAGPATVLEAILERTGYLAELQASTDPQDETRIENLQELAAVAMEF
EQERGEEEQRTLADFLEQVALVADSDQIPDEEDGDGVITLMTLHTAKGLEFPVVFLTGME
DGVFPHMRALGQTKELEEERRLAYVGITRARERLYLTRSTLRSAWGQPSYNPPSRFLEEI
PPTHLEWKRTGATAPASSGPVSAVAASLSSSRSRSSASGASGFATRRTSEKPVVSLAVGD
RVTHDQFGLGTVVAVKGTGGNAEATIDFGDTNPKRLLLRYAPVEKL
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcctctttgacgacagcttcctggcggacctccaggcccagcggggccccgcg
gacgagcccccgccgccgcccgaggacgatcacgtaccggagccggttccggacgatctg
ttcggcgggaagttcgacgcgccgccggaccgtgacgcctactaccggggcggcgccgcg
cgcccgccggtggacgccgccgcgctcctggagggcctgaacgacaaccagcgcgccgcc
gtcgtgcactccggctccccgctgctcatcgtggccggtgccggctccggcaagacccgc
gtgctcacccaccgcatcgcccacctgctcgccgagcgggacgtccacccgggccagatc
ctcgccatcaccttcaccaacaaggccgccggcgagatgaaggagcgcgtcgagcagctc
gtcggcccgcgcgcgaacgccatgtgggtgatgacgttccacagcgcctgcgtgcgcatc
ctgcgccgggagagcaagaagctcggcttcacgtcgagcttctcgatctacgacgccgcc
gactccaagcgcctgatggccctggtctgccgcgacctggacctcgatcccaagcgcttc
ccgccgaagtccttcagcgccaagatcagcaacctgaagaacgagctgatcgacgaggag
gacttcgccgcccaggccgccgacggtttcgagaagaccctcgcccaggcctacgcgatg
taccagtcgcggctgcgcgaggcgaacgccctcgacttcgacgacctgatcatgacgacg
gtcaacctgctgcgcgcctttccggacgtcgccgagcactaccaccgccgcttccgccac
gtcctcgtggacgagtaccaggacaccaaccacgcccagtacgccctcgtccgggagctc
gtgggcacctccgagtaccccgtcgacgtaccgcccagcgcggacgacctgccgcccgcc
gagctctgcgtggtgggtgacgccgaccagtcgatctacgccttccgaggcgcgaccatc
cgcaacatcctccagttcgaggaggactacccggacgcgacgacgatcctgctggagcag
aactaccgctccacgcagacgatcctgagcgcggccaacgcggtcatcgagcgcaacgag
tcccgccgccccaagaacctgtggaccaacgcgggcacgggtgcgcagatcaccggctat
gtcgccgacaccgagcacgacgaggcgcagttcgtcgccgacgagatagaccgtctcacc
gacgcgggcgaggcgaaggcgggcgacgtcgccgtcttctaccgcaccaacgcccagtcc
cgtgtcttcgaagagatcttcatccgcgtcggcctgccctacaaggtcgtcggcggcgtc
cgcttctacgagcgcaaggaggtccgggacgtcctggcctacctgcgggtgctggccaac
ccggaggactcggtgccactgcgccggatcctcaacgtgcccaagcggggcatcggcgac
cgcgccgaggcgatgatcgacgccctctcccagcgggagaagatcagcttcccgcaggcg
ctgaagcgtgtcgacgaggcgtacggcatggccgcgcgctccaccaacgccgtcaagcgg
ttcaacacgctgatggaggacctccgtacggtcgtcgagtccggcgccggccccgccacc
gtgctggaggcgatcctggagcgcaccggatacctcgccgaactgcaggcctccaccgac
ccgcaggacgagacccggatcgagaacctccaggaactcgccgccgtcgccatggagttc
gagcaggagcgcggcgaggaggagcaacgcaccctggccgacttcctcgagcaggtcgcg
ctggtcgccgactccgaccagatccccgacgaggaggacggcgacggcgtcatcaccctg
atgaccctgcacaccgccaagggcctggagttcccggtcgtcttcctgaccggcatggag
gacggggtcttcccgcacatgcgcgccctcggccagaccaaggaactggaggaggagcgg
cgcctggcgtacgtgggcatcacgcgtgcgcgggaacggctgtatctgacgcggtccacc
ctgcgcagcgcctggggtcagccgtcgtacaacccgccctcccggttcctggaggagatc
ccgccgacccacttggagtggaagcggaccggtgcgaccgcgcccgcttcctccgggccg
gtctccgccgtggcggcctcgctgtcgtcgtcccgttcgcgttcgtcggcgtcgggcgcg
tccggtttcgccacgcgccgtacctccgagaagccggtggtgtcgcttgcggtcggggac
cgggtcacgcacgaccagttcgggctcgggacagtcgtggcggtgaagggcacgggcggg
aacgccgaggcgacgatcgacttcggggacaccaacccgaagcggctgctgctgcggtac
gcgccggtggagaagctgtag
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