Streptomyces janthinus: RI060_18250
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Entry
RI060_18250 CDS
T09385
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn00521
Streptomycin biosynthesis
sjn00523
Polyketide sugar unit biosynthesis
sjn00525
Acarbose and validamycin biosynthesis
sjn00541
Biosynthesis of various nucleotide sugars
sjn01055
Biosynthesis of vancomycin group antibiotics
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01250
Biosynthesis of nucleotide sugars
Module
sjn_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
RI060_18250 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RI060_18250 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
RI060_18250 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
RI060_18250 (rfbB)
00525 Acarbose and validamycin biosynthesis
RI060_18250 (rfbB)
Enzymes [BR:
sjn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
RI060_18250 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
NAD_binding_4
NAD_binding_10
NmrA
Motif
Other DBs
NCBI-ProteinID:
WND19171
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Position
complement(4007496..4008479)
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AA seq
327 aa
AA seq
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MNILVTGAAGFIGSHFVRTLLSGGYPGHEDDRVTVVDKLTYAGTLNNLPPHHPRLTFVHG
DICDTPLLDKVFPGHEAVVHFAAESHVDRSVAGAEAFVRTNVLGTQALLEAALRHGTGVF
VQVSTDETYGSIAEGRWTEDEPLLPNSPYAASKASADLIARSYWRTHGLDVRITRCANNY
GPGQHPEKLVPLFVTRLLDGQPVPLYGDGSNLREWLHVDDHCRAVRLVLDEGRPGEIYNI
GGGTHLTNKEMTGRLLELCGRDWDLVQRVADRKGHDFRYAVDDSKIRRELGYAPRWSLED
GLRETVEWYAAHRDHWDAREEGGDGGY
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgaacatcctggtgaccggtgcggccggcttcatcggctcgcacttcgtcagaacactg
ctgagcggcggttacccggggcacgaggacgaccgggtgaccgtcgtggacaagctcacc
tacgcggggacgctgaacaacctgcccccgcaccatccgcggctgaccttcgtgcacggc
gacatctgcgacaccccgctgctggacaaggtcttcccgggccacgaggcggtggtgcac
ttcgccgcggagtcgcacgtggaccgttcggtggcgggcgccgaggccttcgtccgcacg
aacgtgctcggcacacaggccctgctcgaagcggcgctgcggcacgggacgggcgtcttc
gtccaggtctccacggacgagacgtacggctccatcgccgagggacgctggacggaggac
gagccgctgctgcccaactccccgtacgcggcgtccaaggcgtcggccgacctgatcgcc
cggtcgtactggcgcacccacggtctcgacgtgcgcatcacccggtgcgccaacaactac
ggccccggccagcaccccgagaagctggtcccgctgttcgtcacccggctcctcgacggg
cagccggttccgctgtacggggacggctcgaacctgcgggagtggctgcacgtcgacgac
cactgccgggcggtgcggctggtgctggacgagggccggccgggggagatctacaacatc
ggcggcggtacccatctgaccaacaaggagatgaccggccgcctcctcgagctctgcggg
cgcgactgggacctggtccagcgggtggccgaccgcaaggggcacgacttccgctacgcg
gtggacgactccaagatccgccgcgaactcggctacgcgccgcggtggtcgctggaggac
ggactgcgcgagacggtcgagtggtacgccgcccaccgtgaccactgggacgcccgggag
gagggcggcgacggggggtactaa
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