Streptomyces violaceus: RI060_18355
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Entry
RI060_18355 CDS
T09385
Symbol
rfbH
Name
(GenBank) lipopolysaccharide biosynthesis protein RfbH
KO
K13328
dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase [EC:
4.2.1.164
]
Organism
sjn
Streptomyces violaceus
Pathway
sjn00523
Polyketide sugar unit biosynthesis
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
RI060_18355 (rfbH)
Enzymes [BR:
sjn01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.164 dTDP-4-dehydro-2,6-dideoxy-D-glucose 3-dehydratase
RI060_18355 (rfbH)
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GFIT
Motif
Pfam:
DegT_DnrJ_EryC1
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WND19190
LinkDB
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Position
complement(4028961..4030262)
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AA seq
433 aa
AA seq
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MTDTKALVLELARKYHKEQETRAFEPGTTPILSSGAVLDEEDRGALVEAALEMRIAAGVR
TRKFESEFARYFRLRKAHMVNSGSSANLLAVSALTSPKLKDLRLRPGDEAITVGAGFPTT
INPLVQNGLTPVFVDVELGTYNASLAQIEAAISPRTRLIMIAHALGNPFPVAEVAELARR
HDLFLIEDNCDAVGSTYGGRLTGTFGDLSTVSFYPAHHITAGEGGCVLTSSLELARIVES
MRDWGRDCWCEPGTDNTCLKRFDYQLGTLPAGYDHKYIFSHVGYNLKATDLQGALALSQL
RKVDDFGAARRHNWQRLRDGLAEVPGLLLPRATPDSDPSWFGFALTVLPDAGFTRRDLVD
FLESRRIGTRRLFGGNITRHPAYQDVRYRIVDELVNCDIVTEDTFWIGVYPGLTKEMLDY
VVESITEFCTRKG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
gtgacggacaccaaggcgctggtgctggaactggcgcgcaagtaccacaaggaacaggaa
acgcgcgcgttcgaaccggggaccacgccgatcctgtcctcgggcgccgtcctcgacgag
gaggaccggggcgccctggtcgaggcggcgctggagatgcggatcgccgccggggtgcgc
acccggaagttcgagagcgagttcgcccgctacttccggctgcgcaaggcccacatggtg
aactcgggatcgtcggccaacctgctggcggtcagcgcgctcacctcgccgaagctgaag
gacctgcggctgcgccccggtgacgaggccatcacggtgggcgccggcttcccgaccacg
atcaacccgctcgtccagaacggcctgacaccggtcttcgtggacgtggaactgggcacc
tacaacgcctccctggcccagatcgaggcggcgatctccccgcgcaccaggctcatcatg
atcgcgcacgccctgggcaacccgttccccgtcgccgaggtcgcggaactggcccgccgg
cacgatctgttcctcatcgaggacaactgcgacgctgtcggctccacctacgggggcagg
ctcaccggcaccttcggcgacctgtcgacggtgagcttctaccccgcccaccacatcacc
gccggcgagggcggctgcgtcctcacgtcgagtctggaactggcccggatcgtcgagtcg
atgcgcgactggggccgggactgctggtgcgaaccgggcacggacaacacctgcctgaag
cggttcgactaccagctcggcaccctcccggccggctacgaccacaagtacatcttctcc
cacgtcggctacaacctgaaggccaccgacctccaaggcgccctggcgctgagccagttg
cggaaggtcgacgacttcggcgcggcccgtcggcacaactggcagcggctgcgcgacggc
ctggccgaggtgcccggactgctgctgccgcgggccaccccggacagcgaccccagctgg
ttcggcttcgccctgaccgtgctgcccgacgcgggcttcacccgcagggacctcgtcgac
ttcctggagagccgcaggatcggcacccgccggctgttcggcgggaacatcacccgccat
cccgcctaccaggacgtgcgctaccggatcgtggacgagctggtcaactgcgacatcgtc
acggaggacaccttctggatcggcgtctatccggggctcaccaaagaaatgctcgactac
gtcgtcgagtccatcaccgagttctgcacgcgaaagggctga
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