Streptomyces violaceus: RI060_18820
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Entry
RI060_18820 CDS
T09385
Name
(GenBank) Crp/Fnr family transcriptional regulator
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
sjn
Streptomyces violaceus
Pathway
sjn02020
Two-component system
sjn02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RI060_18820
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RI060_18820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjn03000
]
RI060_18820
Transcription factors [BR:
sjn03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
RI060_18820
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
HVO_A0261_N
Crp
MarR_2
GntR
Sigma70_r4
HTH_24
Xre-like-HTH
HTH_29
Sigma70_r4_2
HTH_3
HTH_ParB
YfeC-like
HTH_23
MarR
HTH_36
Motif
Other DBs
NCBI-ProteinID:
WND19275
UniProt:
A0ABY9UBT4
LinkDB
All DBs
Position
4138271..4138945
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AA seq
224 aa
AA seq
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MDDVLRRNPLFAALDDEQATELRASMSEVTLARGDSLFHEGDPGDRLYVVTEGKVKLHRT
SPDGRENMLAVVGPGELIGELSLFDPGPRTATASALTEVKLLGLGHGDLQPWLNARPEVA
TALLRAVARRLRKTNDAMSDLVFSDVPGRVARALLDLSRRFGVQSEEGIHVVHDLTQEEL
AQLVGASRETVNKALADFAQRGWLRLEARAVILLDVERLAKRSR
NT seq
675 nt
NT seq
+upstream
nt +downstream
nt
gtggacgacgttctgcggcgcaacccgctcttcgcggcgctcgatgacgagcaggccacg
gagctccgcgcctccatgagtgaggtgaccctcgcgcgcggcgactcgctgttccacgag
ggggaccccggcgaccgcctgtacgtggtcacggaaggcaaggtcaagctccaccgcacg
tccccggacggccgcgagaacatgctggccgtggtcggccccggcgagctcatcggcgag
ctgtcgctcttcgacccgggcccgcgtaccgcgacggcctccgcactgaccgaggtcaag
ctgctcggtctcggccacggcgatctccagccctggctgaacgcccgccccgaggtggcc
acggcgcttctgcgcgctgtcgcccgccggctgcgcaagaccaacgacgcgatgtccgac
ctcgtcttctcggacgttccgggccgggtcgcccgcgccctgctggacctgtcccgccgg
ttcggcgtgcagtccgaggagggcatccacgtcgtccacgacctcacgcaggaggagctg
gcccagctggtcggcgcgtcccgcgagacggtcaacaaggcgctggcggacttcgcccag
cgcggctggctccgcctggaggcccgcgcggtgatcctgctggacgtggaacgcctcgcc
aagcgctcgcgctga
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