Streptomyces violaceus: RI060_18890
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Entry
RI060_18890 CDS
T09385
Name
(GenBank) RHS repeat-associated core domain-containing protein
Organism
sjn
Streptomyces violaceus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
DUF6531
TEN_YD-shell
RHS
WXG100
T7SS_signal
EspA_EspE
EspB_PPE
T7SS_ESX_EspC
Motif
Other DBs
NCBI-ProteinID:
WND19288
LinkDB
All DBs
Position
4150427..4154857
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AA seq
1476 aa
AA seq
DB search
MVDLNPLHYINKFNHMMGDSVAQGLEFLGITDPAVDPEGVREIAKKWRHLATGLDDAAEA
ARKALADVEWEGKAAKAFHKRSKAARKQATEMADSLRDGAKALDDFADKAHELLTEIGVI
LVEIAEFEIAGLALSVLTGGTSAVVSSLMAGQRAAKVVALVARIEKEGTALASAIRGVME
VIRAVERALKALREIRGVAAAARMGKEGAKFAAFDTLLKDPNAFSDPDKLAKILTEGALL
GIGFGALGKALGKGLKALKPAQLAQMTKGLKLNCATFERLRLNPGFDKLPASVRNMVKKF
VRDPIDVATGDMALTRTDVALPGVLPLILERTHISSYRFGGWFGPTWASTLDQRVQADDE
GLVHATADGARLCFPFPDPNTNEPVRPETPGSRLTLAWDDEVDGAIRITDPDTGLTHVFH
SPVPAACDTAVDLPLQHIRDRNGNRITIVYAAGGDIPTAVVHSGGYHLALDHHPSLPLIT
GLRLLDPVTPQAPGTTLLTFGYNENGHLVEETNSSGLPMRYTYDAEGRITSWVDRNDTTY
WYAYDDQGRVVATGGTGDCLASTIEYDATARTTRVTDSLGHICVYEYNESLRLVRETDPL
GNVTTQEWDDELQLIAMTDPLGAVRRYAYDEHGRVTQVVRPDGQELHSEYNALGLPTNIT
GPDGAVWHQEYNEHGDRVAVTDPVGATTRFTYDSKGRLTSVTDALGNTTGVRCNEAGLPI
EFTDPLAALTRYERDAFGRPSLITDPLGNATRQEWTVEGKLIRRTAADGTTERWTYDAEG
NRITHEDASGAVTRFEYTHFDLLAARTGPDGVRHTYAYDTELRLREVTDPLGMIWSYVYD
ASGQLVSETDFDNRTVTYAHDGAGRLTSCSDTLGQTTRFVRDALGQLTRKEAADQVTAYT
YTPTGQLATARTGDVTLRRAFDPAGRLLSETVNGRTTTYTYDLLGRRTRRTTPTGAVSSW
SYDTASRPTELITAGRAINFTHDAAGRELSRRIGTTSVLSHSFDPLGRLAAQSLLGPSGQ
PLQARSYAYRADGQLIRIEDRLNGTRHFGLDDAGRVTAVHAADWTERYAYDAAGNQLDAS
WPAVHPGQEATGPRDYAGTRLTRAGNVRYEHDAAGRITLRQKTRLSRKPDTWRFTWNSED
RLSSVTTPDGTRWQYLHDPLGRRIAKMRLSSDEGTVVERTDFTWDGTTLCEQTTSSAELR
HPVTLTWDHQDLHPIAQTERINVADATQDEIDSRFFAIVTDLVGTPTELVDEAGSIAWRA
RTTLWGTTSWASDSTTYTPLRFPGQYFDPETEVHYNYHRHYDPQTARYLTPDPLGLAPAP
NPSTYVHNPHAWTDPLGLAPRCEETIPGYRKQTDHPLSRRIHIGEDGKVTITGKGALYVN
LSGDVGHTVRFRGESGQIVEFQISAEFREKIRRTAIPQKQPDGLGFTREEWKQLKKVCPE
ISDPTMGDDLYGIPSGMLDEFRREVAKYPGRVVQEG
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgacctcaaccccctgcactacatcaacaagttcaaccacatgatgggcgacagc
gtcgcccaaggtctggagttcctcggcatcaccgaccctgccgtggacccggaaggcgta
cgggagatcgccaagaagtggcggcacctggccaccggcctggacgacgctgcggaggcc
gcgcggaaggcgctggcggacgtcgagtgggagggcaaggcggccaaggctttccacaag
cgttccaaggccgcccgcaaacaggccacggagatggcggactccctgcgcgatggtgcc
aaggcgctcgacgacttcgccgacaaggcgcacgagttgctgaccgagatcggcgtcatc
ctggtggagatcgccgagttcgagatcgccggcctggccctgtccgtgctgaccggcggc
acttccgcggtcgtctcctccctgatggccggccagcgagcggcgaaagtcgttgcgctg
gtggcccggatcgagaaagagggcaccgcgcttgcctccgctatccgcggcgtgatggag
gtcatccgcgctgtggagcgggcactcaaggcgctgagggagatccgcggtgtcgccgcg
gcggccagaatgggcaaggaaggcgcgaagttcgccgccttcgacaccctgctgaaggac
ccgaacgcattctccgacccggacaagttggccaagatcctcaccgagggcgccctgctg
ggcatcggcttcggcgccctgggcaaggccctcggcaagggcctcaaagccctcaagccg
gcccaactggcgcaaatgaccaagggtttgaagctgaactgcgccaccttcgaacggctg
aggctgaatccgggattcgacaagctgccggcgtcggtccgcaacatggtcaagaaattc
gtgcgggacccgatcgacgtggccaccggcgacatggccctcacccgcaccgacgtggcc
cttcccggcgtcctgccgctgatcctggaacgcacccatatatcgtcgtaccgcttcggg
ggctggttcggccccacctgggcctcgaccctcgaccagcgcgtgcaggccgacgacgag
ggcctggtccacgccacagcggacggtgcccgcctctgcttccccttcccggacccgaac
acgaacgaaccggtccggccggagacgcccggctcccggctcacgctggcctgggacgac
gaggtggacggcgcgatccgcatcacggaccccgacaccgggctgacccatgtcttccac
agccccgtccccgcggcctgcgacacagcggtcgacctaccgctgcagcacatccgtgac
cgcaacggcaaccgcatcaccatcgtctatgccgccggcggcgacatccccaccgcggtg
gtccactccggcggctaccacctcgccctggaccaccacccctctctgcccctcatcacc
ggcctgcgcctcctcgatccggtcacacctcaggcgcccggcaccactttgctcaccttc
ggctacaacgagaacggccatctggtggaggagaccaactcctccggcctgccgatgcgt
tacacctacgacgcggaaggccggatcacgtcgtgggtcgaccgcaacgacacgacgtac
tggtacgcgtacgacgaccagggccgagtcgtggccaccggcggcactggcgattgcctc
gcttcgaccatcgagtacgacgccacagcccgtaccactcgcgtcaccgactccttgggc
cacatttgcgtctacgaatacaacgaaagcctgcgcctggtccgcgagaccgacccgctc
ggcaacgtcacgactcaggagtgggacgatgagctgcaactcatcgcgatgacagacccg
ttgggtgccgtcaggcgatatgcctatgacgagcacggccgcgtcacgcaggtggtgcgg
ccggacggccaggaattgcattccgagtacaacgccctcggcctgcccacgaacatcacc
gggcccgacggggcggtctggcaccaggagtacaacgagcatggcgaccgggtcgccgtg
accgacccagtaggggccacgacccgtttcacctacgactccaaggggcgcctgacctct
gtcacggatgcactggggaacaccacaggagtccggtgcaacgaggcgggactgcccatc
gagttcaccgatccgctggcagcactcacccggtacgaacgtgacgccttcggccggccg
agcctgatcaccgaccctctcgggaacgcgacccgccaggagtggacagtggagggcaag
ctcatccggcgcaccgcggcagacggaaccactgagaggtggacctacgacgccgaaggc
aaccgcatcacccacgaggacgccagcggagcggtcacgcggttcgagtacacccacttc
gacctgctggcggcccgcaccgggcccgacggcgtgcgccacacctacgcctacgacacc
gagctccgcctgcgagaggtcaccgaccccctcggcatgatctggagctacgtctacgac
gcctccggacaactggtctccgagacagacttcgacaaccgcaccgtcacctacgctcac
gacggcgcgggccgcctcacctcctgcagcgacacgctggggcagaccacccgattcgta
cgggacgcgctggggcaactcacccggaaggaagccgccgaccaggtcaccgcctacacg
tacaccccgacgggccagcttgccacggcccgtactggagacgtcacgctccggcgggcc
ttcgaccctgcgggccggctgctgtcggaaaccgtcaatggccgtacgaccacctacaca
tacgacctgctgggtcgccgcacgaggcgcacgaccccgacgggagcggtgagctcctgg
agctacgacacggccagtcgccccaccgaactcatcaccgccggccgtgccatcaacttc
acgcacgacgcggcgggccgtgagctgagccgccgcatcggcacgacatccgtcctgagc
cactctttcgacccgctcggccgcctcgccgctcagtccttgctgggcccctcaggccaa
cccctccaagcaaggagctacgcctatcgggcggacggtcagctcatccgcatcgaggat
cggctcaacggcacccgtcacttcggcctcgacgacgccggccgtgtcacggcagtccac
gccgcggactggaccgagcgctacgcctatgacgcagccggcaaccagctcgacgcgtcc
tggcccgcggtgcacccgggccaggaggccaccggcccgcgcgactacgctggtacacgc
ctcacccgcgccgggaacgtccggtacgagcacgacgcggccggccgaatcacgctacgc
cagaagacccggctgtcccgcaaaccggacacctggcgcttcacctggaactccgaggac
cgtctctcgtccgtcaccacaccggacggcacccggtggcagtacctccacgacccgctc
gggcgacggatcgccaagatgcgcttgtcatccgatgagggcacggtcgtcgagagaacc
gacttcacctgggacggcaccaccctctgcgagcagaccacctcttctgccgagttgcgc
catccggtcaccctcacgtgggaccaccaggacctgcaccccatcgctcagaccgaacgc
atcaacgtcgcggacgcgactcaggacgagatcgactcccgcttcttcgcgatcgtcacc
gacctcgtcggtacccccaccgaactggtcgacgaagccggcagcatcgcttggcgcgct
cgcaccacgctgtggggcaccacgtcttgggcatccgacagcacgacctacaccccgcta
cggttcccggggcagtacttcgaccccgagacggaagtccactacaactaccaccggcac
tacgatccgcagaccgctcgctacctcactccggacccgctcgggctcgcacccgcgccc
aatccgtccacctacgtacacaacccgcacgcgtggaccgaccccctgggactcgcacca
cgatgcgaggagaccattcccggctaccgcaagcagaccgatcaccccctgagccggcgg
atccacatcggtgaggatggcaaggtgaccatcaccggtaagggagccctgtacgtgaac
ctgagtggggatgtaggacacacagtgcggttccgcggcgagagtggtcagatcgtggag
ttccagatctcggcagaatttcgggagaagatcagaaggacagcgattccacagaagcag
ccggacgggctggggttcaccagggaagagtggaagcaactcaagaaggtctgccctgag
atatccgacccgaccatgggagacgatctctacgggattcccagcggcatgctcgatgag
ttcaggagagaagtggcgaagtatccgggcagggtagtccaggaaggttga
DBGET
integrated database retrieval system
