Streptomyces violaceus: RI060_20475
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Entry
RI060_20475 CDS
T09385
Symbol
aspS
Name
(GenBank) aspartate--tRNA ligase
KO
K01876
aspartyl-tRNA synthetase [EC:
6.1.1.12
]
Organism
sjn
Streptomyces violaceus
Pathway
sjn00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
RI060_20475 (aspS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjn01007
]
RI060_20475 (aspS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjn03016
]
RI060_20475 (aspS)
03029 Mitochondrial biogenesis [BR:
sjn03029
]
RI060_20475 (aspS)
Enzymes [BR:
sjn01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.12 aspartate---tRNA ligase
RI060_20475 (aspS)
Amino acid related enzymes [BR:
sjn01007
]
Aminoacyl-tRNA synthetase
Class II (A)
RI060_20475 (aspS)
Transfer RNA biogenesis [BR:
sjn03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
RI060_20475 (aspS)
Prokaryotic type
Other AARSs
RI060_20475 (aspS)
Mitochondrial biogenesis [BR:
sjn03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
RI060_20475 (aspS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
GAD
tRNA_anti-codon
tRNA-synt_2b
Motif
Other DBs
NCBI-ProteinID:
WND19581
LinkDB
All DBs
Position
complement(4477543..4479306)
Genome browser
AA seq
587 aa
AA seq
DB search
MHRYRSHTCGELRSSDVGTDVRLSGWLHNRRDLGGILFIDLRDHYGITQLVARPGTPSYE
ALDKLSKESTVRIDGKVVSRGAENINPELPTGEVEVEVGDVELLGAAAPLPFTINAEDGV
NEERRLEYRFLDLRRERMHRNIMLRTAVISAIRHKMTALGFNEMATPILSATSPEGARDF
VVPSRLHPGKFYALPQAPQQFKQLLMISGFDRYFQIAPCFRDEDARADRSPGEFYQLDVE
MSFVEQEDVFQPVEKLMTELFEEFGGGRHVTSPFPRIPFREAMLKYGSDKPDLRAQLELV
DITDVFEGSEFKAFAGKHVRALAVPDVSAQPRKFFDQLGDYAVSQGAKGLAWVRVAEDGS
LTGPIAKFLTEENVAELTKRLSLAAGHAVFFGAGEFDEVSKIMGAVRVEAAKRAGHFEEN
VFRFCWIVDFPMYEKDEETGAIDFSHNPFSMPQGGLEALETQDPLDILGWQYDIVCNGVE
LSSGAIRNHEPEIMLKAFEIAGYDRETVEEKFAGMLRAFRFGAPPHGGIAPGVDRIVMLL
ADEPNIRETISFPLNGNAQDLMMGAPTELEETRLKELHLSVRKPQPK
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgcatcggtacaggtcccacacctgcggcgagctccgctcctctgacgtcggcaccgac
gtccggctgagtggctggctgcacaatcggcgcgacctgggcggcatcctcttcatcgat
ctgcgcgatcactacggcatcacgcagctcgtggcccgtcccggcaccccctcctacgag
gctctcgacaagctctccaaggagtcgaccgtccgcatcgacggcaaggtcgtctcccgc
ggcgccgagaacatcaaccccgagctgccgaccggtgaggtcgaggtcgaggtcggcgac
gtcgagctgctcggcgcggccgccccgctgcccttcaccatcaacgccgaggacggggtc
aacgaggagcggcgcctggagtaccgcttcctggacctgcgccgcgagcgcatgcaccgc
aacatcatgctgcgtacggcggtcatctcggcgatccggcacaagatgacggcgctgggc
ttcaacgagatggcgacgccgatcctgtccgcgacctcccccgagggcgcccgcgacttc
gtcgtcccgtcccgcctgcacccgggcaagttctacgcccttccccaggcgccccagcag
ttcaagcagctgctgatgatctccggcttcgaccgctacttccagatcgcgccctgcttc
cgcgacgaggacgcccgcgcggaccgctcgcccggcgagttctaccagctcgacgtcgag
atgagcttcgtcgagcaggaggacgtcttccagccggtcgagaagctgatgaccgagctg
ttcgaggagttcggcggcggacgccacgtcacctcgccgttcccgcggatcccgttccgc
gaggcgatgctgaagtacggctccgacaagccagacctgcgcgcccagctcgaactcgtc
gacatcaccgacgtcttcgagggctcggagttcaaggcgttcgccggcaagcacgtgcgt
gccctggcggtgccggacgtctcggcgcagccccgcaagttcttcgaccagctcggcgac
tacgccgtctcgcagggcgccaagggcctggcctgggtccgcgtcgccgaggacggctcg
ctcaccggcccgatcgcgaagttcctcaccgaggagaacgtcgccgagctgaccaagcgc
ctgtcgctggcggccggccacgcggtcttcttcggcgcgggcgagttcgacgaggtctcg
aagatcatgggcgcggtgcgggtcgaggccgccaagcgtgcggggcacttcgaggagaac
gtcttccgcttctgctggatcgtcgacttcccgatgtacgagaaggacgaggagaccggc
gcgatcgacttctcgcacaaccccttctccatgccgcagggcggtctggaggccctggag
acccaggacccgctggacatcctgggctggcagtacgacatcgtctgcaacggcgtcgag
ctgtcctccggcgcgatccggaaccacgagccggagatcatgctcaaggccttcgagatc
gccgggtacgaccgcgagaccgtcgaggagaagttcgccggcatgctgcgcgccttccgc
ttcggcgccccgccgcacggcggcatcgccccgggcgtcgaccgcatcgtcatgctgctc
gccgacgagcccaacatccgcgagaccatctccttcccgctcaacggcaacgcccaggac
ctgatgatgggcgcgccgacggagctggaggagacgcggctgaaggagctgcacctgtcg
gtgcgcaagccgcagccgaagtag
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