Streptomyces janthinus: RI060_21080
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Entry
RI060_21080 CDS
T09385
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sjn
Streptomyces janthinus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjn03032
]
RI060_21080 (gyrA)
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_21080 (gyrA)
Enzymes [BR:
sjn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
RI060_21080 (gyrA)
DNA replication proteins [BR:
sjn03032
]
Prokaryotic type
DNA Topoisomerases
RI060_21080 (gyrA)
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
RI060_21080 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
FaeA
Motif
Other DBs
NCBI-ProteinID:
WND19692
LinkDB
All DBs
Position
complement(4617999..4620593)
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AA seq
864 aa
AA seq
DB search
MTDENTPVTTPEGDALAMRVEPVGLETEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRV
LYAMYDGGYRPERGFYKCARVVGDVMGNYHPHGDSSIYDALVRLAQSWSMRMPLVDSNGN
FGSPGNDPAAAMRYTECKMAPLSMEMVRDIDEETVDFTDNYDGRSQEPTVLPARFPNLLI
NGSAGIAVGMATNIPPHNLREVAAGAQWYLENPEASHEELLDALLERIKGPDFPTGALVV
GRKGIEEAYRTGRGSITMRAVIEVEEIQNRQCLVVTELPYQVNPDNLAQKIADLVKDGKI
GGIADVRDETSSRTGQRLVIVLKRDAVAKVVLNNLYKHTDLQTNFGANMLALVDGVPRTL
SLDAFIRHWVTHQIEVIVRRTRFRLRKAEERAHILRGLLKALDAIDEVIALIRRSDTVEI
ARHGLMDLLEIDEIQANAILEMQLRRLAALERQKIVQEHDELQAKITEYNAILASPVRQR
GIVSEELAAIVEKYGDDRQTKLIPYEGDMSIEDLIAEEDIVVTVTRGGYIKRTKTDDYRA
QKRGGKGVRGTKLKEDDIVDHFFVSTTHHWLLFFTNKGRVYRVKGYELPDAGRDARGQHV
ANLLAFQPDEAIAEILAIRDYEAVPYLVLATKAGLVKKTPLKDYDSPRSGGVIAINLREQ
QDGSDDELIGAELVSADDDLLLISKKAQSIRFTASDETLRPMGRATSGVKGMSFRETDEL
LSMNVVRPGTFVFTATDGGYAKRTNVDEYRVQGRGGLGIKAAKIVEDRGSLVGALVVEET
DEILAITLSGGVIRTRVNEIRETGRDTMGVQLINLGKRDAVVGIARNAEAGREAEEVDGD
VVVDETAEGAATTGTDEGEAPSSE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgagaacactcccgtgacgacgcccgagggtgacgccctggccatgcgcgtc
gagcccgtcgggctcgagacggagatgcagcgctcgtacctcgactacgcgatgtccgtc
atcgtctcgcgtgcgctgccggacgtccgggacggcctcaagcccgtccaccgccgcgtg
ctgtacgccatgtacgacggcggctaccgccccgagcgcggcttctacaagtgcgcccgc
gtcgtcggcgacgtcatgggcaactaccacccgcacggcgactcctcgatctacgacgcg
ctcgtgcgcctcgcccagtcctggtcgatgcgcatgccgctcgtcgactccaacggcaac
ttcggctctccgggcaacgacccggcggcggccatgcggtacaccgagtgcaagatggcg
ccgctgtcgatggagatggtccgtgacatcgacgaggagaccgtcgacttcacggacaac
tacgacggccgttcccaggagccgaccgtcctgccggcccgcttcccgaacctgctgatc
aacggctcggccggtatcgcggtcggcatggcgaccaacatcccgccgcacaacctccgc
gaggtcgcggccggcgcccagtggtacctggagaaccccgaggcctcgcacgaggagctc
ctggacgcgctgctcgagcgcatcaagggccccgacttcccgaccggcgcgctcgtcgtc
ggccgcaagggcatcgaggaggcgtaccgcaccggccgcggctccatcaccatgcgcgcg
gtcatcgaggtcgaggagatccagaaccgccagtgcctggtggtgacggaactgccgtac
caggtcaacccggacaacctcgcgcagaagatcgccgacctggtgaaggacggcaagatc
ggcggcatcgccgacgtccgcgacgagacgtcgtcgcgcacgggccagcgcctggtcatc
gtgctgaagcgggacgcggtcgccaaggtcgtcctgaacaacctctacaagcacaccgac
ctgcagacgaacttcggcgccaacatgctggcgctggtggacggcgtgccccgcacgctc
tcgctcgacgcgttcatccgccactgggtgacgcaccagatcgaggtcatcgtccgccgt
acgcgcttcaggctgcgcaaggccgaggagcgggcacacatcctgcgcggtctgctgaag
gccctggacgccatcgacgaggtcatcgcgctgatccggcgcagtgacaccgtcgagatc
gcgcgccacggcctgatggacctcctggagatcgacgagatccaggccaacgccatcctc
gagatgcagctgcgccggctcgccgccctggagcgccagaagatcgtccaggagcacgac
gagctccaggcgaagatcacggagtacaacgcgatcctcgccagcccggtccgccagcgc
gggatcgtcagcgaggagctggccgcgatcgtcgagaagtacggcgacgaccgccagacg
aagctgatcccgtacgagggcgacatgtccatcgaggacctgatcgccgaggaggacatc
gtcgtcacggtcacccggggcggctacatcaagcgcaccaagaccgacgactaccgggcc
cagaagcgcggcggcaagggcgtccgcggcacgaagctcaaggaagacgacatcgtcgac
cacttcttcgtgtccaccacgcaccactggctgctgttcttcaccaacaagggccgcgtc
taccgcgtcaagggctacgagctgcccgacgccggccgggacgcgcgcggccagcacgtc
gcgaacctgctcgccttccagccggacgaggcgatcgccgagatcctggcgatccgcgac
tacgaggcggttccctacctcgttctcgccaccaaggccgggctggtgaagaagacgcct
ctgaaggattacgattcgccccgttccggcggtgtcatcgccatcaacctccgtgagcag
caggacggttcggacgacgaactgatcggagccgagcttgtctcggcggacgatgatctg
cttctgatcagcaagaaggcccaatcgatcaggttcaccgcatcggacgaaactctgcga
ccgatgggccgtgccacctcgggtgtcaagggcatgagcttccgcgagactgacgagctg
ctctcgatgaatgttgttcgacccggtacgttcgtgttcactgccacagacggcgggtac
gcgaagcggaccaacgtcgacgagtaccgcgtccagggtcgcggcggcctcggcatcaag
gccgccaagatcgtcgaggaccgtggctccctcgtcggcgcgctggtggtcgaggagacc
gacgagatcctcgccatcacgctgtcgggcggtgtgattcgtacgcgagtcaacgagatc
agggaaaccggccgtgacaccatgggcgtccaactgatcaatctgggcaagcgcgatgcc
gtggtcggcatcgctcgcaacgccgaggcgggacgcgaggcggaagaggtcgacggcgat
gtcgtcgtcgacgagaccgccgaaggcgccgcgaccaccggcacggacgagggtgaggcg
ccctcgtctgagtag
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