Streptomyces janthinus: RI060_21800
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Entry
RI060_21800 CDS
T09385
Name
(GenBank) PAS domain-containing protein
Organism
sjn
Streptomyces janthinus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS
PAS_9
PAS_4
PAS_8
Diguanyl_cycl_sensor
Response_reg
PAS_7
PAS_10
DUF6634
TPX2
Motif
Other DBs
NCBI-ProteinID:
WND19827
LinkDB
All DBs
Position
complement(4773305..4777951)
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AA seq
1548 aa
AA seq
DB search
MSSRPSRGAARLAAILDALPDALVLVNANGTVVNANTIALEAFETPGTALVGRGLLDLLP
QFDSKLIPGSMRRPEHLDPHARTKPTRMIARRTDGTEFPVEVTSANLENGQQAYDGYGYT
GDELLMLVVRDLSGTVDTEAELARSQRQTEMILRAASEGVVGTDTDGRIVLVNPAAAQIL
GFRASDLGGRELHDLVLHSRADGSSFPYEESPLADTLRSGRKHRVRGQVLYAKDGGKVPV
DLTTAPVRDGDQLVGAVMTFTDRRPYDAVVEEKEAAAKRHEEELERVAEEHASELTALRQ
RHVTELEELSERHAEELGANEDRYAALGEREKDRYEALAARHEQLLTLLGRSLRGPLEEL
RRELAALASDDAGQLWPEANQVLHHLSAGYSRITTLIDNVLGYQRLDTGSENIARTKVML
DAVVASGVDGAVELIGPGRVQFAVHAPPIEAEVDPRLLATALAHLVADVAGVDATGNTPL
SAGGYLDNTVVVAAAQRGEVVRIEVRGPYAGGDTVHEPIVRGIVRAHGGVLQTHDVPGMS
GSAYVLEVPIGGGAGAVAADAAAQAMDEGVPGASGEQTFGGGRRRARRPSTDAFLDGDVP
AEGDEADGSGGSGGATGRRRRRAAGEPAALPAPASGEGAGSGGTGRRRGRPAEGAAAEAV
AAGAVGSAVQGVAEGAVVTAAEHAAGTAAVGTGLGGTVPPQGVPDASGQRARREPGEQRA
LPPALPAPSGDAGSGAADAASGQAQQPTGRRRRALAAANERAAQQAAAGPRPVFALPPAE
ADQTTPDEPVHQGVQAGQTAQGQGAVAVAAAAAASGDGVAEEGRHDAVPHDQSADHTPPQ
PHPTSAPTGRRRRAMVPQQGQGAAVQAPGAAGAVPAGAVPNGSVAASPGQGAPAQQDAAG
QVPPGQGAPVQAGVAAAQGAPGAAVPPQQGNAVQPQGNTPQGNAPQGVSLPAQGGLGHSV
QAALPGQALQPPAQGARPLPQQGVAAPAQQPSAGQPLPAEAAPGQGTPAQGTPAQGTPAQ
GTPAQGTPAQGTPAQGTPAQGGTPAPQPWPAADDDSTGAGFAVPPNGTPPKAPQPNTPAP
NTPAPNTPAPGTPLPPEGAAQAQRAAQPLPAEASAPVDPNSTQGRAISVRTLGQGVPFNR
QAAQVQQPPAVSVPLPTATPPPHQPGGSGRRRKLGTPPDPATRTDQATRTEPASRPEQGP
RPEQAARPEQAARPHPASEATPPPVAAQAPAPAQAPAPAQAPAPVPAQPSLAGQSRLAQL
TEGGGRSYAIGAPDENAAEGPEPLDGPGGAVEVADPPRPQPMDDELPPEPLDNPRRLLVW
PAPDVSTQQALSDRGYRPVIVNSREEVNAQIAAFPAALFVDPLTGPITRTALQSLRQAAV
AAEVPVLVTAGLGQASRDAAYGADPAVLLKALAPRDSEQHPPRVLLIEEHAEIALALTAT
LERRGMQVARAASDADAVTLASDFRPNLVVMDLMQVHRRQAGFAGIIDWLRANGQLNRTP
LVVYTAAVDQADLPRLASGETVLFLAERSTSGEVQTRIVELLSRIGTN
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
gtgagcagcaggccatcccgaggcgctgctcgcctcgcagccatactggatgcgctcccc
gacgcgttggtgctggtcaatgccaacgggacggtcgtcaacgccaacaccatcgccctg
gaggccttcgagactccgggcaccgctctggtggggcgcgggctgctcgatctgctgccg
cagttcgactccaagctcatccccggctccatgcgacggccggagcatctcgatccgcat
gcccggaccaagccgacccggatgatcgcccgcaggacggacgggaccgagttccccgtc
gaggtcaccagtgcgaatctggagaacgggcagcaggcctacgacggttacggctacacc
ggcgacgagctgctcatgctcgtcgtgcgtgacttgtccgggaccgtggacaccgaggcc
gagctcgcgcggtcgcagcggcagaccgagatgattctgcgggccgcgtccgagggcgtc
gtcgggaccgataccgacgggcggatcgtgctcgtcaatccggccgccgctcagatactg
ggtttccgggccagcgatctcggcgggcgtgaactgcacgacctcgtgctgcactcgcgt
gccgacgggtcgagcttcccgtacgaggagtcgccgctcgccgacaccctgcgctccggg
cgcaagcaccgggtgcgcgggcaggtgctgtacgccaaggacggcggcaaggttccggtc
gatctgacgaccgcgcccgtgcgggacggcgaccagctcgtcggcgccgtgatgaccttc
accgaccggcggccgtacgacgcggtcgtcgaggagaaggaggcggcggccaagcgccac
gaggaagagctggagcgggtcgccgaggagcacgcctccgagctgaccgcgctgcgccag
cggcacgtcaccgagctggaggagctgagcgagcggcacgccgaggaactcggcgcgaac
gaggatcggtacgccgcgctcggggagcgggagaaggaccggtacgaggcgctcgccgcc
cggcacgagcagttgctgaccctgctgggacggtcgctgcgcgggccgctcgaggaactg
cgccgcgagctggccgcgctggcctccgacgacgccgggcagctgtggcccgaggccaac
caggtgctgcatcacctgtccgccggctactcgcggatcacgacgctcatcgacaacgtc
ctcggctaccagcggctcgacacgggcagcgagaacatcgcccgtacgaaggtgatgctg
gacgccgtcgtcgcctccggggtcgacggggccgtcgagctcatcgggcccgggcgggtg
cagttcgccgtgcacgcgccgcccatcgaggccgaggtcgatccccggctgctcgcgacc
gccctcgcgcatctggtcgcggacgtggcgggggtcgacgcgaccggcaacacgcccctg
tcggcgggcggttatctggacaacaccgtcgtggtggcggcggcgcagcgcggcgaggtc
gtgcgcatcgaggtgcgcgggccgtacgccggtggcgacaccgtgcacgagccgatcgtg
cgggggatcgtccgggctcatggtggcgtgctgcagacgcatgacgtgccggggatgagc
gggagcgcgtacgtcctcgaggtgccgatcgggggcggggccggggccgttgccgcggat
gccgccgcccaggcaatggacgagggcgttcccggggcctccggtgagcagacctttggc
ggggggcggcgccgggcgcggcggccctccaccgatgccttcctggacggagatgttccg
gctgagggcgacgaggctgatggttccggtgggtccggtggtgctaccgggcggcgcagg
aggcgggccgccggggaaccggccgctcttccggcgccggcttccggtgagggcgccgga
tcgggcggtaccgggcggcggcgcgggcgtccggccgagggcgccgctgcggaggcagtc
gccgcgggggccgtcgggagtgccgtccagggtgtcgccgagggggccgtcgtcacggcc
gccgagcatgcggccgggaccgccgccgtgggtacggggctgggcgggaccgttccgccg
cagggcgtgcccgacgcctccgggcagcgggcccggcgggaacccggtgagcagcgcgcg
ctgccgccggcgctgcccgcgccgtccggtgacgccggctccggtgcggccgatgcggca
tcgggacaggcccagcagccgaccgggcgtcggcggcgtgcgctggccgccgccaacgag
cgggcggcgcagcaggccgccgcggggccgcgtccggtgttcgccctgccgccggccgag
gccgatcagacgaccccggacgaaccggtccaccagggggttcaggccggacagaccgcc
caggggcagggggccgtggcggttgccgcggcggcggccgcctccggtgacggggtggcc
gaggaggggcggcacgacgccgtaccgcacgaccagtccgccgatcacactccgccgcag
ccgcatcccacgagtgcgccgacgggccgtcggcggcgggccatggtgccgcagcagggc
cagggagccgcggtgcaggcgcccggtgcggcgggtgccgtaccggcgggtgccgtaccg
aatggttccgtggctgcgagtcccgggcagggggctcccgcgcagcaggacgccgcgggt
caggtcccgccggggcagggcgcgcccgtccaggccggggtggccgctgcccagggcgcg
ccgggtgcggccgtgccgccgcagcagggcaacgccgttcagccccaggggaacaccccc
caaggaaacgccccgcagggcgtgtccctccccgcacagggcgggctcgggcacagcgtg
caggcggccctcccggggcaggcgctgcagcctccggcccagggcgcgcggcccctgccg
cagcagggcgtcgccgcaccggcgcagcagccctccgccgggcagccgctgcccgccgag
gccgccccggggcagggaacaccggcccaaggcaccccggcccaaggcaccccggcccaa
ggcaccccggcccaaggcaccccggctcagggcactcccgcccaggggaccccggctcag
ggcggcacccccgccccccagccctggccagccgccgacgacgacagcacgggggccggt
ttcgccgtaccgccgaacggcacaccccctaaggccccacagccgaacaccccggctccg
aacaccccggccccgaacactccagccccgggcaccccgttgccgccggagggcgcggcg
caggcgcagcgggcggcccagccgttgcccgcggaggcctcggcgcccgtcgatccgaac
tcgacgcaggggcgggcgatcagcgtgcggacgctggggcagggcgtgccgttcaaccgg
caggcggcccaggtccagcagccgccggccgtgtccgtccccctgccgacggcgacgcct
cccccgcaccagccgggcggatcgggccggcgccgcaagctcggcacgccgcccgacccg
gccacgcgtaccgatcaggccacgcgtacggaaccggcgtcccgtccggagcagggtccg
cgccccgagcaggcagcgcgtccggagcaggccgcgcgcccgcatccggcgagcgaggcg
acacccccgccggtcgccgcccaggcgcccgcgcccgcccaggcgcccgcgcccgcccag
gcgcccgcgcccgtcccggcgcagccgtccctcgccggtcagtcccggctcgcgcagctg
accgagggcggcggccggtcgtacgccataggcgctcccgacgagaacgccgccgagggg
cccgagccgctggacgggcccgggggtgccgtcgaggtggccgatccgccgcggccgcag
ccgatggacgacgagttgccgccggagccgctggacaacccgcggcggctgctggtgtgg
cccgcgccggacgtcagcacccagcaggcgctgagcgaccgcggctaccggccggtgatc
gtgaactcgcgcgaggaggtcaacgcgcagatcgcggcgttccccgccgcgctgttcgtc
gacccgctgaccgggccgatcacccgtacggcgctgcagtcgctgcgccaggccgccgtg
gccgccgaggtgccggtcctcgtgacggccgggctcggacaggcctcgcgggacgcggcc
tacggtgccgatccggccgtgctgctgaaggcgctggcgccgcgcgacagtgagcagcac
ccgccgcgggtgctgctgatcgaggagcacgcggagatcgcgctggcgctgacggcgacg
ctggagcggcgcgggatgcaggtcgcgcgggccgcgagcgacgcggacgcggtgacgctg
gcgagcgacttccggccgaacctggtcgtgatggacctgatgcaggtgcaccggcgacag
gccgggttcgccgggatcatcgactggctgcgcgcgaacgggcaactgaaccgcaccccg
ctcgtcgtctacaccgccgccgtcgaccaggcagacctgccgaggctggcctccggggaa
acggtgctgttcctcgcggagcggtccaccagcggcgaggtgcagacccggatcgtcgag
ctgctgagcaggatcgggaccaactga
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