Streptomyces janthinus: RI060_22055
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Entry
RI060_22055 CDS
T09385
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sjn
Streptomyces janthinus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjn03021
]
RI060_22055
Transcription machinery [BR:
sjn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RI060_22055
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
HTH_23
HTH_Crp_2
Sigma70_ECF
HTH_3
HTH_24
MarR
DUF7343
HTH_31
Motif
Other DBs
NCBI-ProteinID:
WND19871
LinkDB
All DBs
Position
complement(4826337..4827239)
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AA seq
300 aa
AA seq
DB search
MSAEQGSSKVLTLAESETAPHALDSLGPIDDAPALAAEPVPALPAAGAIDTRTLSRSLFL
RLAALDEDSPERAYVRDTLIELNLPLVRYAAARFRSRNEPMEDIVQVGTIGLIKAIDRFD
CERGVEFPTFAMPTVVGEIKRFFRDTSWSVRVPRRLQELRLALTKASDELSQKLDRSPTV
PELAAVLGVSEEDVVDGLAVGNAYTASSLDSPAPEDDGGEGSLADRLGYEDTALEGVEYR
ESLKPLLAKLPPRERRIIMLRFFANMTQSQIGEEVGISQMHVSRLLTRTLAQLREGLISD
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcagaacagggcagctcgaaggtgctcacgctcgcggagagcgagacagctccc
catgctctcgactcactcggccccatcgatgatgctccggcactggcggccgagcccgtc
ccggccctgccggctgcgggcgccatcgacacccgcaccctgtcccgctccctgttcctg
cggctggccgcgctcgacgaggacagccccgagcgtgcgtatgtccgtgacacgctgatc
gagctcaatctgccgctggtgcggtacgccgcggcgcggttccgttcgcggaacgagccg
atggaggacatcgtccaggtcggcacgatcgggctgatcaaggcgatcgaccggttcgac
tgcgaacgcggggtggagttcccgacgttcgcgatgccgacggtggtcggtgagatcaag
cggttcttccgcgacacgtcgtggtcggtgcgggtgccgcggcgcctgcaggagctgcgg
ctcgccctgaccaaggccagtgacgagctctcgcagaagctggaccgctctcctacggtc
cccgaactcgcggccgtgctcggggtgtccgaggaggacgtcgtcgacgggctggcggtg
gggaacgcgtacacggcgtcctcgctggactcgccggctccggaggacgacggcggcgag
ggctcgctggcggaccggctggggtacgaggacaccgcgctggagggcgtggagtaccgc
gagtccctgaagccgctgctggccaagctgccgcctcgtgagcggcggatcatcatgctg
cggttcttcgcgaacatgacccagtcgcagatcggcgaggaggtcggcatctcgcagatg
cacgtctcccgcctgctgacgcggacgctggcgcagctgcgggaagggctgatctcggac
tga
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