Streptomyces janthinus: RI060_22480
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Entry
RI060_22480 CDS
T09385
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sjn
Streptomyces janthinus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjn03021
]
RI060_22480
Transcription machinery [BR:
sjn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RI060_22480
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
MarR_2
Sigma70_ECF
HTH_Crp_2
MarR
HTH_37
HTH_3
HTH_Tnp_4
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WND19940
LinkDB
All DBs
Position
complement(4908282..4909142)
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AA seq
286 aa
AA seq
DB search
MTATTRIGTTTDTGTETSEVLPRIAEPQKLAPQDARGLTGQFLDRLAVLEEGTPEYQYAR
NTLIEMNMSLVRFAARRFRGSGQTMEDVVQVGIIGLIKAIDRFEVSREVQFTSFAVPYII
GEIKRFFRDTSWAVHVPRRLQEARTELAKATEELASRLGRAPRVAELAALMNLTEEQVVE
AQVAANGYLSSSLDATVGGDADESDATLSEFIGEEDPALELVEDFHALAPLVAELDERQR
LILHLRFVEELTQAEIGTRLGISQMHVSRLISRTVARLRAGMLTTG
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
gtgacggcgaccacgcgcatcggcaccacgacggataccggcaccgagaccagtgaggtg
ctgccccggatcgccgagccgcagaagctcgccccgcaggacgcgcgcgggctgaccgga
cagttcctggaccggctcgccgtactggaggagggcactcccgagtaccagtacgcgcgc
aacacgctcatcgagatgaacatgtcgctggtgcggttcgcggcccgccggttccgcggc
agcggccagacgatggaggacgtcgtccaggtcggcatcatcgggctgatcaaggcgatc
gaccgcttcgaggtctcccgcgaggtgcagttcaccagcttcgcggtgccctacatcatc
ggcgagatcaagcggttcttccgcgacacgtcctgggccgtgcacgtgccgcgccgcctc
caggaggcccgtacggaactcgccaaggccaccgaggagctggcctcccgcctcggccgc
gcgccccgggtcgccgaactggcggccctgatgaacctcaccgaggagcaggtcgtcgag
gcccaggtcgcggcgaacggctacctgtcctcgtccctcgacgcgacggtcggcggcgac
gcggacgaaagcgacgcgacgctctcggagttcatcggcgaggaggacccggccctggaa
ctggtcgaggacttccacgccctcgctcccctggtcgccgaactcgacgaacgccagcga
ctcatcctccacctgcgcttcgtggaagaactcacccaggccgaaatcggcacccgcctc
ggcatctcccagatgcacgtgtcccgcctcatctccaggacggtggcacggctgcgggcg
gggatgctgaccacgggctga
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