Streptomyces violaceus: RI060_26540
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Entry
RI060_26540 CDS
T09385
Name
(GenBank) very short patch repair endonuclease
KO
K07458
DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-]
Organism
sjn
Streptomyces violaceus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_26540
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
RI060_26540
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vsr
MTES_1575
DUF559
Motif
Other DBs
NCBI-ProteinID:
WND20672
UniProt:
A0ABY9UCP9
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Position
complement(5795016..5795459)
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AA seq
147 aa
AA seq
DB search
MSRQPSKDTGVELAVRRLLHAAGLRYRVEYPVPGMPRRRIDVAFPRAKIAVLIDGCFWHG
CPQHATHPKSNADWWRTKLDRNMARDRETTDHLLAGGWTVLRFWEHMPAEEVAARVRAAV
DQEKLARGRRKQKAREEYRPMSGGADG
NT seq
444 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacaacccagcaaggacacgggcgtcgaactggccgtgcgccggctcttgcac
gcagccgggctgcgttatcgcgtggagtaccccgtgccgggcatgccccggcggcggatc
gacgtggcgttcccccgggccaagatcgcggtcctcatcgacggctgtttctggcacggc
tgccctcaacacgcgactcacccgaagtccaacgcggactggtggcgcaccaagctcgac
cggaacatggcccgcgaccgggagacgacggaccatctgctcgccggggggtggacggtg
ctgaggttctgggagcacatgccggcggaagaggtcgcggcgagggtacgggcggcagtg
gaccaggagaagctggctcggggccgacggaagcagaaggcacgagaggaatatcgtccg
atgagcgggggagcggatggctga
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