Streptomyces violaceus: RI060_26885
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Entry
RI060_26885 CDS
T09385
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sjn
Streptomyces violaceus
Pathway
sjn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RI060_26885 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sjn03019
]
RI060_26885 (orn)
03009 Ribosome biogenesis [BR:
sjn03009
]
RI060_26885 (orn)
Messenger RNA biogenesis [BR:
sjn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RI060_26885 (orn)
Ribosome biogenesis [BR:
sjn03009
]
Eukaryotic type
Pre-60S particles
RNases
RI060_26885 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WND20734
UniProt:
A0ABY9UEA6
LinkDB
All DBs
Position
complement(5871193..5871795)
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AA seq
200 aa
AA seq
DB search
MNDRMVWIDCEMTGLSLSDDALIEVAALVTDSELNVLGEGVDIVIRPPDRALETMPDVVR
QMHTASGLLTELPDGTTLKDAEEQVLAYVREFVKEPGKAPLCGNSVGTDRGFLLRDMPTL
EGYLHYRIVDVSSVKELARRWYPRAYFNSPKKNGNHRALADIRESIAELRYYREAVFVPQ
PGPDSDTAKKIAAKHVLPAQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcgcatggtgtggatcgactgcgagatgaccggcctctcgctgtcggacgac
gcgctcatcgaggtggccgccctcgtgaccgactccgagctgaacgtgctcggcgagggc
gtggacatcgtcatccgtccgccggaccgggcgctggagacgatgccggatgtggtgcgc
cagatgcacaccgcgtccgggctgctcaccgagctgccggacggcacgacgctgaaggac
gccgaggagcaggtcctggcgtacgtgagggagttcgtcaaggagccgggcaaggccccg
ctgtgcggcaactccgtcggcacggaccgcggcttcctgctgcgcgacatgccgacgctg
gagggctacctccactaccggatcgtcgatgtctcgtcggtcaaggagctggcccgccgc
tggtatccgcgggcgtacttcaacagcccgaagaagaacggcaaccaccgcgcgctcgcc
gacatccgcgagtccatcgcggagctgcgctactaccgcgaggccgtcttcgtcccgcag
cccgggcccgactcggacaccgcgaagaagatcgccgcgaagcacgttctgcctgctcag
taa
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