Streptomyces violaceus: RI060_28005
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Entry
RI060_28005 CDS
T09385
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sjn
Streptomyces violaceus
Pathway
sjn00550
Peptidoglycan biosynthesis
sjn01100
Metabolic pathways
sjn01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RI060_28005 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
RI060_28005 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sjn01011
]
RI060_28005 (mrdA)
Enzymes [BR:
sjn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
RI060_28005 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sjn01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
RI060_28005 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
WND20945
LinkDB
All DBs
Position
6128191..6130437
Genome browser
AA seq
748 aa
AA seq
DB search
MTNIPETGRNTRVQIRLVVIQVLVLSLLLTLGGRLWYLQIREGAAYAKEASGNHVQQVVQ
PAVRGSILDARGVALADNETRLVVSASRTDLLKMPDDGKDVLAKLAKVLGMTPKEVQAKV
RLCDSETPQPCWNGSPYQPIPITDEATPKQALQIRERAEDFPGITAEPEAMRRYPSPGKA
NTAQVLGYLSPVTDEEIKQAQNTNSPYLRSDQVGRSGLERQYDKQLRGKAGVTRYEVDNL
GRVIGQAEADPTHPGDNLVTSIDSRVQRIAEYQLNEAMKEARKQHDRNTGTNYKADSGAV
VVMEAKTGRVVAMASNPNYDPNAWVGGISAKDYARLTGKSSNYPLLNRAIQGQSAPGSIF
KVIPTAAAINAGYSFDGPYQCSSSFNLGGQVFKNFESKGYGPISLGRALEVSCDTVFYRL
SHEEWKRDGGAKPKKKTNDWFYKTAHQFGLGKETGIDLPNEVTGRVPDRQWKLDYWKANK
DAWCRTGKRNGSYAEKIAYENCLEGNRMRAGDSVNYSIGQGDTLVTPIQMATIYGAISNG
GTLYNPSVGKAVISADGKTVTPIKPQPHGKLPMSKTTRDRIDDALAGVATRGTAAWRFGG
WPQDKIPMHAKTGTAEVYGKQTTSWFATYTKDYTVVMTIAQGGTGSGASGPAVRNIYNAL
YGVSEDGEINKKKALLPTPQEALPKVRTDGTISSPKVSKDPAKDQRAKKKDPNAPADPSQ
PATAAPPTPENRDTRRRRRRRGSRRWAA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaacattcccgagaccggccggaacacccgggtccagatccggctcgtcgtcatc
caggttctcgtcctctccctcctgctcaccctcggcggacgcctgtggtacctccagatc
cgtgagggcgcggcgtacgccaaggaggcgtccgggaaccacgtccagcaggtcgtccag
cccgccgtccgcggttcgatcctggacgcgcgcggtgtcgccctcgccgacaacgagacc
cggctggtcgtctccgcctcccgtaccgacctgctgaagatgccggacgacggcaaggac
gtcctcgccaagctcgcgaaagtcctgggcatgacgcccaaggaggtccaggcgaaggtc
cggctgtgcgactccgagacgccccagccctgctggaacggctcgccgtaccagcccatc
cccatcaccgacgaggccacccccaagcaggccctgcagatccgcgagcgcgccgaggac
ttccccggcatcaccgccgagccggaggccatgcgccgctacccgagccccggcaaggcc
aacaccgcccaggtcctcggctacctctcgccggtcaccgacgaggagatcaagcaggcc
cagaacaccaactcgccgtacctgcgctccgaccaggtcggccgctccgggctggaacgc
cagtacgacaagcagctgcgcggcaaggcaggcgtcacgcgctacgaggtcgacaacctc
ggccgcgtcatcggccaggccgaggccgaccccacccacccgggcgacaacctcgtcacc
agcatcgactcccgcgtccagcggatcgccgagtaccagctgaacgaggccatgaaggaa
gcccgcaagcagcacgaccggaacaccggcaccaactacaaggccgactccggcgccgtc
gtggtgatggaggccaagaccggccgggtcgtcgccatggcgtccaacccgaactacgac
ccgaacgcctgggtcggcggcatctccgccaaggactacgcgcggctcaccggaaagagc
tccaactacccgctgctcaaccgcgcgatccagggccagtcggcgcccggctcgatcttc
aaggtcatccccacggccgccgcgatcaacgccgggtactccttcgacgggccctaccag
tgctccagctcgttcaacctcggcggccaggtcttcaagaacttcgagtccaagggatac
ggcccgatcagcctcggccgcgccctggaggtctcctgcgacaccgtcttctaccggctc
tcccacgaggagtggaagcgcgacggcggagccaagccgaagaagaagaccaacgactgg
ttctacaagaccgcccaccagttcggcctcggcaaggagaccggcatcgacctgcccaac
gaggtcaccggccgcgtccccgaccgccagtggaagctggactactggaaggccaacaag
gacgcctggtgccgcaccggcaagcgcaacggcagctacgccgagaagatcgcctacgag
aactgcctcgaaggcaaccgcatgcgcgccggtgactccgtcaactactccatcgggcag
ggcgacaccctcgtcaccccgatccagatggccaccatctacggggccatctccaacggc
ggcaccctctacaacccctccgtcggcaaggccgtcatcagtgccgacggcaagaccgtc
acgccgatcaagccccagccgcacggcaagctgccgatgtcgaagacgacgcgcgaccgg
atagacgatgccctcgcgggagtcgccacccgcggtacggccgcctggaggttcggcggc
tggccgcaggacaagatcccgatgcacgccaagacgggtacggccgaggtctacggcaag
cagacgacctcctggttcgccacctacaccaaggactacacggtcgtcatgacgatcgcg
cagggtggtacgggctccggtgcctcgggccccgccgtccgcaacatctacaacgcgctg
tacggcgtctccgaggacggcgagatcaacaagaagaaggccctgctgcccaccccgcag
gaggccctgccgaaggtcaggaccgacggcaccatctcctccccgaaggtctccaaggac
ccggccaaggaccagcgggcgaagaagaaggacccgaacgccccggccgacccgagccag
ccggcgacggcggccccgccgacgccggagaaccgtgacacccgaaggcggcggcgccgg
cggggaagccggaggtgggcggcatga
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