Streptomyces violaceus: RI060_31115
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Entry
RI060_31115 CDS
T09385
Name
(GenBank) tetratricopeptide repeat protein
Organism
sjn
Streptomyces violaceus
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_10
TPR_12
Zein
AAA_16
Peptidase_C14
NACHT
AAA_22
ATPase_2
nSTAND_NTPase5
TraD_C
AAA_29
Rad17
Motif
Other DBs
NCBI-ProteinID:
WND21524
UniProt:
A0ABY9UF47
LinkDB
All DBs
Position
complement(6806568..6811631)
Genome browser
AA seq
1687 aa
AA seq
DB search
MNEASEFKATALCVVCESYDDSRTFPQLVGAKAQMEEIAGLLEGLGFDVRLVGGGNPDRA
AFDREVEEWSEGWRRSGGRKPALILWSGHGVLADDELRLVLSDLKPGDHVGTRKVRIRRQ
GVSTEELIGYAVSSEADQILVVVDTCYAGDGVGDGVRTALKHWSEISLPPGRTKWLGSMA
SCQRNEPSDGDGPLLRALAAVLREGPRTDEYLSAWSAHNELISGVELLAALPTRWEAEGQ
RPARAAVGDERPAFPNPLARPGTAPSLVEHLVLAARGVGHREEGWFFSGRQRVLGEIIAW
MEAATPGLFLVTGPAGCGKSAVLGRIATLADPEQHREAERQGALREGDPDPGVRDARTFA
AVHLRGLDATRAAAELAARLGLPEPRNADALRAELRELPTPPVLVLDGLDEVPAEHTQGV
IEELVFPLSRMLPVLVGSRERPFRGRLKEGETLPDALVRHIGDSVTTVDLEAEPDTRQDI
AEYVRRRCEAAEVDGAGVAEALADRATAQDGGFLFARLVTGFLVARLRELGGLRDTEDLL
AGLPDSVETAFEEDLLSGPRRVHDDGTELPSAARDLLTALAWAAGRGMPAGGVWEAVASA
LGGQGVVYDEGDLDWVLSAYGRYIVEDGAGTQAVYRLYHREFVSHLRWREGPEGAAEVVV
LRAVVDLLKRQAEADGWERVDPYVRTWLAHHAAWASVPGPGIDVLRDLVVWDRENALPHL
AEALLEVSVATSGNAQHTAAVEFAREATDIYRDLADRDTAYLPDLAGSLNNLANRLADTG
DRQGALEPAHEAVRIRRQLAHTNPAAYLPDLAMALNNLAIRLADTGDRQGALEPAHQAVR
IRRQLAHTNPAAYLPDLAGSLNNLANHLSETGDRQGALEPAHQAVRHYTQLAHTNPAAYL
PNLAMALNNLANHLAGTGDRQGALEPAHQAVRHYTQLAHTNPAAYLPDLAGSLNNLAATL
AETGDRQGALEPAHQAVRHYTQLARTNPAAYLPDLAMALNNLAIRLAETGDRQGALEPAH
EAVRIRRQLAHTNPAAYLPDLAMALNNLANRLAETGDRQGALEPAHQAVRIRRQLAHTNP
AAYLPDLAGSLNNLAATLAETGDRQGALEPAHEAVRHYTQLAHTNPAAYLPDLAMALNNL
AIRLGETGDRQGALEPAHEAVRIRRQLVHTNPAAYLPDLAGSLNNLAIRLAETGDRQGAL
EPAHQAVRHYTQLAHTNPAAYLPNLAMALNNLANHLAGTGDRQGALEPAHQAVRHYTQLA
HTNPAAYLPDLAMALNNLANHLAETGDRQGALEPAHQAVRHNTQLARTNPAAYLPDLAGS
LNNLANRLAGTGDEPAAIRAYADTAAGLAQAHPAAARAIEYERAAFQVGRSEPTRTSGLL
ELIRIVNDESADQPGEIVLRARQTLRAHAHTSRDNRESLEQTWRQETDTPAPDWLSLPED
TLNLVVEWVNTPTWTDSRAFWSRHADALGADEAATALAEFALAWPVAEQHQRIRELVLSE
GMDSVFPALILRDTLSGWLECEGWEASKRFFQENSEVLLDESAEKALTETDDVTPSIAVH
VALLGIARTEDIDTAFQCVQDRDALQQHVLRALNDGDAQALAYAAAIEGLVFDDELSSAT
HRQAALLLAGDPESLDLDALAEAAAEADPETRNRLTSELATLATRSPDPQHTAHWFRLVR
ALTQPRP
NT seq
5064 nt
NT seq
+upstream
nt +downstream
nt
gtgaatgaggcttcggagttcaaggccaccgcgctgtgcgtggtgtgcgagtcgtacgac
gactctcggaccttcccccaactggtgggcgccaaggcccagatggaggagatcgccggc
ctcctcgaagggctgggcttcgacgtgcggctggtgggcgggggaaacccggaccgggct
gccttcgaccgggaggtcgaggagtggagcgagggctggcggcgctcggggggccgcaag
cccgcgttgatcctctggtcggggcacggtgtcctcgccgacgacgaactgcggctcgtc
ctcagcgatctgaagcccggcgaccatgtggggacgcgaaaggtccggatacgcagacag
ggcgtgtccaccgaagagctgatcggatacgcggtctcctcggaggccgatcagatcctg
gtggtcgtcgacacctgctacgcgggcgacggcgtcggagacggcgtccggaccgccctg
aaacactggtccgagatctcccttccgcccggccggaccaagtggctcggcagcatggcg
agctgccagcgcaacgagccctcggacggcgacggcccgctgctgcgggcactggcggcg
gtgctgcgggaggggccacggacggacgaatacctgagtgcgtggagcgcgcacaacgag
ctcatcagtggggtcgagctgctggcggcactgccgaccagatgggaggcggagggccag
cggcccgcgcgcgccgccgtgggcgacgaacgcccggcgtttcccaatcccctcgcccgg
ccggggaccgcgccgtccctcgtggagcacctggtgctcgccgcgcgcggcgtggggcac
cgggaggagggctggttcttcagcggacggcagcgggtactcggggagatcatcgcgtgg
atggaggcagcgactcccggtctcttcctggtcaccgggcccgcagggtgcggcaagtcg
gcggtgctcggacgcatcgcgacgctcgcggaccccgagcagcaccgagaggccgagcgg
cagggagcactccgggagggtgacccggacccgggtgtacgggacgcccggaccttcgcg
gccgtgcatctgcggggcctcgacgcgacacgggccgccgccgaactcgccgcccggctg
gggttgcccgagccgaggaacgcggacgccctgagagccgagctgcgcgagcttccgacg
cctcccgtcctggtcctcgacggtctcgacgaggtgccggccgagcacacccagggcgtg
atcgaggagctggtctttccgctgagccggatgctcccggtgctggtcggctccagggaa
cggcccttccggggcaggctgaaggagggcgagaccctgccggacgccctggtccgccac
atcggcgacagcgtcacgacggtggacctggaggccgagccggacacccggcaggacatc
gccgagtacgtacggcggcgttgcgaggccgccgaggtcgacggggccggggtcgccgag
gccctggcggaccgcgcgacggcacaggacggggggttcctcttcgcccggctggtcacc
ggcttcctcgtcgcgcggctccgcgagctcgggggcctccgggacaccgaggacctgctc
gccgggctgcccgactccgtggagaccgcgttcgaggaggacctgctctcagggccacgg
cgggtacacgacgacggcaccgaactcccctcggcggcgcgggacctcctcactgcgctc
gcgtgggccgccggccggggcatgcccgcgggcggagtctgggaggcggtggcctcggcc
ctcggcgggcagggtgtcgtctacgacgagggcgacctggactgggtcctgtccgcctat
ggccgctacatcgtcgaggacggtgcgggcacccaggccgtgtaccggttgtaccaccgg
gagttcgtctcacatctgaggtggcgcgagggacccgagggggcggccgaggtggtcgtg
ctgcgggctgtggtggacctcctcaagcggcaggccgaggccgacggctgggaacgggtc
gatccgtacgtacggacctggctggcccaccacgcggcgtgggccagcgtccccgggccg
ggcatcgacgtactgcgtgaccttgtggtgtgggaccgggagaacgccctgccgcatttg
gcggaggcgctgctcgaggtctccgtcgctacgtcggggaacgcgcaacacacggctgcc
gtggaattcgctcgcgaggcaaccgacatctacagggacctggctgacagagacacggct
tatctccccgacctcgccggatcactcaacaacctcgccaaccgcctggccgacaccgga
gaccgccaaggcgccctcgaacccgcccacgaagccgtacgcatccgacgccaactcgcc
cacaccaaccccgccgcctacctccccgacctcgccatggcactcaacaacctcgccatc
cgcctggccgacaccggagaccgacaaggcgccctcgaacccgcccaccaagccgtacgc
atccgacgccaactcgcccacaccaaccccgccgcctacctccccgacctcgccggatca
ctcaacaacctcgccaaccacctatccgagaccggagaccgacaaggcgccctcgaaccc
gcccaccaagccgtacgccactacacccaactcgcccacaccaaccccgccgcctacctc
cccaacctcgccatggcactcaacaacctcgccaaccacctggccggcaccggagaccgc
caaggcgccctcgaacccgcccaccaagccgtacgccactacacccaactcgcccacacc
aaccccgccgcctacctccccgacctcgccggatcactcaacaacctcgccgcaaccctg
gccgagaccggagaccgacaaggcgccctcgaacccgcccaccaagccgtacgccactac
acccaactcgcccgcaccaaccccgccgcctacctccccgacctcgccatggcactcaac
aacctcgccatccgcctggccgagaccggagaccgacaaggcgccctcgaacccgcccac
gaagccgtacgcatccgacggcaactggcccacaccaaccccgccgcctacctccccgac
ctcgccatggcactcaacaacctcgccaaccgcctggccgagaccggagaccgccaaggc
gccctcgaacccgcccaccaagccgtacgcatccgacgccaactcgcccacaccaacccc
gccgcctacctccccgacctcgccggatcactcaacaacctcgccgcaaccctggccgag
accggagaccgccaaggcgccctcgaacccgcccacgaagccgtacgccactacacccaa
ctcgcccacaccaaccccgccgcctacctccccgacctcgccatggcactcaacaacctc
gccatccgcctgggtgagaccggagaccgacaaggcgccctcgaacccgcccacgaagcc
gtacgcatccgacgccaactcgtccacaccaaccccgccgcctacctccccgacctcgcc
ggatcactcaacaacctcgccatccgcctggccgagaccggagaccgccaaggcgccctc
gaacccgcccaccaagccgtacgccactacacccaactcgcccacaccaaccccgccgcc
tacctccccaacctcgccatggcactcaacaacctcgccaaccacctggccggcaccgga
gaccgccaaggcgccctcgaacccgcccaccaagccgtacgccactacacccaactcgcc
cacaccaaccccgccgcctacctccccgacctcgccatggcactcaacaacctcgccaac
cacctggccgagaccggagaccgacaaggcgccctcgaacccgcccaccaagccgtacgc
cacaacacccaactcgcccgcaccaaccccgccgcctacctccccgacctcgccggatca
ctcaacaacctcgccaaccgcctggccggcaccggagacgaaccagccgccatccgggcc
tacgcggacacggccgccgggctcgctcaggcccatccggccgccgcacgcgcgatcgag
tacgagcgtgcggccttccaagtcggacgttccgagcccacgcgcacctccggtctgctg
gagctcatccgcatcgtcaacgacgagtcggccgaccaacccggtgagatcgtcctgcgc
gcccggcaaacgctccgggcccacgcccacacctcccgtgacaatcgcgagtctctggag
cagacctggcggcaggagacggatacccccgcccccgactggctgtcgctcccggaggac
actctgaacctggtcgtcgagtgggtgaacacgcccacctggacggacagccgggccttc
tggtcacgccacgccgacgccctcggtgcagacgaagccgcaacagcattggcggagttc
gctctcgcctggccggtcgccgagcagcaccagcgcatcagggaactggtcctctccgaa
ggcatggactccgtcttcccggccctgatcctccgggacacgctctccggctggctggag
tgcgagggctgggaagcttcgaagcgctttttccaggagaacagcgaagtcctcctcgac
gagtccgcggagaaggccctcaccgaaaccgacgacgtcacccccagcatcgcggttcac
gtggccctcctggggatcgcccgcaccgaggacatcgacaccgcgttccagtgcgtccag
gaccgagacgccctccagcagcatgtcctccgtgctctgaacgacggcgacgcccaggca
ctcgcgtacgccgcggccatcgaaggcttggtcttcgacgacgagctctcctccgccacc
caccgccaggccgccctcctcctcgccggcgaccccgagtccctggacctggacgccctc
gccgaggcggcggccgaagccgacccggagactcgcaaccggctcacctccgaactggcg
accctcgccacccgctcccccgacccgcagcacaccgcccactggtttcgcctggtccga
gccctcacccagccccgtccatga
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