Streptomyces janthinus: RI060_32035
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Entry
RI060_32035 CDS
T09385
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn03030
DNA replication
sjn03410
Base excision repair
sjn03420
Nucleotide excision repair
sjn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RI060_32035 (polA)
03410 Base excision repair
RI060_32035 (polA)
03420 Nucleotide excision repair
RI060_32035 (polA)
03440 Homologous recombination
RI060_32035 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjn03032
]
RI060_32035 (polA)
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_32035 (polA)
Enzymes [BR:
sjn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RI060_32035 (polA)
DNA replication proteins [BR:
sjn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RI060_32035 (polA)
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RI060_32035 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RI060_32035 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
DNA_pol_A_exo1
DNA_pol_lambd_f
HHH_5
HHH_2
NYN_YacP
Motif
Other DBs
NCBI-ProteinID:
WND21698
LinkDB
All DBs
Position
7017031..7019757
Genome browser
AA seq
908 aa
AA seq
DB search
MAETASKTTDKTSGGSRPRLMLMDGHSLAYRAFFALPAENFTTATGQPTNAIYGFASMLA
NTLRDEEPTHFAVAFDVSRKTWRSQEFTEYKANRSKTPDEFKGQVELIGELLDAMGAARF
AVDGFEADDVIATLATQAEAEGFEVLIVTGDRDSFQLVSEHTTVLYPTKGVSELTRFTPE
KVFEKYGLTPAQYPDFAALRGDPSDNLPGIPGVGEKTAAKWINQFGSFADLVERVEEVKG
KAGQNLRDHLEAVKLNRRLTELERRVELPKGVTDLERAPYDRTAVAVVLDTLEIRNPSLR
ERLFAVDPGAEEAETTPVSTEGVHLDGTVLGTGELTGWLTEHGTQPLGIATVDTWALGTG
SVAEVALAAPGGPAAWFDPSQLDEADETAFAAWLADADRPKTFHNAKGAMRVFAEHGWSI
EGVTMDTALAAYLVKPGRRSFDLDALSLEYLHRELTPAAAADGQLAFGADEGAEAEALMI
QARTVLDLGQAFESRLEEVGAADLLRDMELPTSALLARMERHGIAADRPHLEAMEQMFAG
AVQQAVKEAHAAAGHEFNLGSPKQLQEVLFGELALPKTKRTKTGYTTDADALAWLAAQTD
NELPVIMLRHREQAKLRVTVEGLIKTIAADGRIHTTFNQTVAATGRLSSTDPNLQNIPVR
TDEGRAIRRGFVVGEGFESLMTADYSQIELRVMAHLSEDEGLIEAFTSGEDLHTTAASQV
FAVEPTAVDAEMRRKIKAMSYGLAYGLSAFGLSQQLNIEAAEARALMDAYFERFGGVRDY
LRRAVDEARATGYTATLFGRRRYLPDLNSDNRQRREAAERMALNAPIQGTAADIVKIAML
KVGSALKEAGLESRMLLQVHDEVVLEIAPGERAAAEELVRREMANAVHLRVPLGVSVGAG
ADWESAAH
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
gtggcagagacagcatcgaagacgaccgacaagacctccggcggcagccgtccgcgactg
atgctcatggacgggcactcgctggcctaccgcgcgttcttcgcgctgcccgcggagaac
ttcaccaccgcgacgggccagccgacgaacgcgatctacggcttcgcgtcgatgctggcc
aacacgctgcgcgacgaggagcccacgcacttcgcggtcgccttcgacgtctcccgcaag
acctggcggtcgcaggagttcacggagtacaaggcgaaccgctccaagaccccggacgag
ttcaagggccaggtcgagctgatcggcgagctcctcgacgcgatgggcgccgcccgcttc
gcggtggacggcttcgaggcggacgacgtgatcgccaccctcgccacccaggccgaggcc
gagggcttcgaggtgctgatcgtcaccggcgaccgcgactccttccagctggtcagcgag
cacaccacggtgctgtacccgaccaagggcgtctccgagctgacccgcttcaccccggag
aaggtgttcgagaagtacgggttgacgcccgcgcagtaccccgacttcgcagccctgcgc
ggcgacccctccgacaacctccccggcatccccggcgtcggcgagaagaccgccgcgaag
tggatcaaccagttcggctccttcgcggacctcgtcgagcgcgtcgaggaggtcaagggc
aaggccggccagaacctccgcgaccacctcgaagcggtcaagctcaaccgccggctcacc
gagctggagcgccgggtggagctccccaagggcgtcaccgacctggagcgggcgccctac
gaccgcacggccgtcgcggtggtcctggacaccctggagatccgcaacccctcgctgcgc
gagcggctcttcgccgtcgaccccggcgccgaggaggccgagaccaccccggtcagcacg
gagggcgtgcatctggacggcacggtgctcggcaccggcgagctgaccggctggctcacc
gagcacggcacgcagcccctcggtatcgccacggtcgacacctgggcgctcggcaccggc
tcggtcgccgaggtcgcgctcgccgcgcccggcggaccggccgcctggttcgacccctcc
cagctggacgaggccgacgagacggccttcgccgcctggctcgccgacgccgaccggccc
aagaccttccacaacgccaagggcgccatgcgggtcttcgccgagcacggctggagcatc
gagggcgtcaccatggacaccgcgctcgccgcctacctggtcaagccgggccgccgctcc
ttcgacctggacgcgctgtccctggagtacctgcaccgcgagctgacccccgccgccgct
gccgacggccagctcgccttcggcgcggacgaaggcgccgaggccgaggccctgatgatc
caggcccgcaccgtcctcgatctgggccaggccttcgagagccgcctggaggaggtcggc
gccgccgacctcctgcgcgacatggagctgcccacgtccgcgctgctcgcccgcatggag
cggcacggcatcgcggccgaccggccccacctggaggccatggagcagatgttcgccggc
gccgtccagcaggcggtgaaggaggcccacgcggcggccggacacgagttcaacctgggc
tcgcccaagcagcttcaggaagtcctcttcggcgagctggccctgcccaagacgaagcgg
acgaagaccggctacaccacggacgccgacgccctcgcctggctcgccgcccagacggac
aacgagctgccggtgatcatgctccgccaccgcgagcaggccaagctccgcgtcaccgtc
gagggcctgatcaagacgatcgccgccgacggccggatccacaccaccttcaaccagacg
gtcgccgccaccggccgcctgtcctcgacggatccgaacctgcagaacatcccggtccgc
accgacgagggccgcgccatccgccgcggcttcgtcgtcggcgagggcttcgagtccctg
atgacggccgactacagccagatcgagctgcgcgtgatggcccacctctccgaggacgag
ggcctgatcgaggccttcacctcgggcgaggacctgcacaccacggccgcctcacaggtc
ttcgcggtcgagccgaccgcggtggacgccgagatgcgccgcaagatcaaggccatgtcc
tacggcctggcctacggactgtcggccttcggcctgtcccagcagctgaacatcgaggcg
gcggaggcccgcgccctgatggacgcgtacttcgagcggttcggcggcgtacgggactat
ctgcgccgggcggtcgacgaggcccgggcgacgggctacacggcgacgctcttcgggcgc
cgccgctacctccccgacctcaacagcgacaaccgccagcgccgcgaggcggcggagcgg
atggccctcaacgcgcccatccagggcacggcggccgacatcgtgaagatcgccatgctc
aaggtgggcagcgcgctgaaggaggccgggctggaatcccggatgctgctccaggtgcac
gacgaagtcgtgctggagatcgccccgggcgagcgcgcggccgccgaggaactcgtccgc
cgcgagatggcgaacgcggttcacctccgtgtcccgctgggcgtctcggtgggcgcgggg
gcggactgggagtcggcggcacactag
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