Streptomyces violaceus: RI060_34255
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Entry
RI060_34255 CDS
T09385
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
sjn
Streptomyces violaceus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
sjn03051
]
RI060_34255 (pafA)
Enzymes [BR:
sjn01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
RI060_34255 (pafA)
Proteasome [BR:
sjn03051
]
Prokaryotic proteasome
Bacterial regulatory particles
RI060_34255 (pafA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pup_ligase
Ribosomal_L19
HTH_25
Motif
Other DBs
NCBI-ProteinID:
WND22115
UniProt:
A0ABY9UH53
LinkDB
All DBs
Position
7495842..7497203
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AA seq
453 aa
AA seq
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MDRRIFGLENEYGVTCTFRGQRRLSPDEVARYLFRRVVSWGRSSNVFLRNGARLYLDVGS
HPEYATPECDNVTELVTHDKAGERILEGLLVDAERRLHEEGIAGDVYLFKNNTDSAGNSY
GCHENYLVARHGEFSRLADILIPFLVTRQLLCGAGKVLQTPRGAVYCVSQRAEHIWEGVS
SATTRSRPIINTRDEPHADAERYRRLHVIVGDSNMSETTMLLKVGATDLVLRMIEAGTVM
RDLTLENPIRAIREVSHDITGRRKVRLASGREASALEVQREYYEKAVDFCERRGIRTGTV
EQVLELWGRTLDAIEAEDLDRIGTEIDWVMKYKLIERYRSKNNMTMSHPRVAQIDLAYHD
IHRRRGLYYLLEKKGQAARICNDLKIFEGKSVPPQTTRARLRGDFIRRAQEQRRDFTVDW
VHLKLNDQAQRTVLCKDPFRSVDDRVEKLIAGM
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccgcattttcgggctggagaacgagtacggcgtcacgtgcacgttcagggga
cagcgccgcctgtctcctgacgaggtggcgcggtacctcttccgccgtgtcgtgtcatgg
ggccgcagcagcaatgtctttctgcgaaacggcgcccgcctctatctcgacgtgggctca
catccggaatacgccacaccggaatgtgacaacgtgaccgaactggtcacccacgacaaa
gcgggcgagcgcattctcgaaggactcctggtggacgccgaacgacgcctgcacgaggag
ggaatcgcgggcgacgtctacctcttcaagaacaacaccgattcggcgggcaactcctac
ggctgccacgagaactatctggtcgcccggcacggggagttctcccggctcgcggacatt
ctcattccgtttctggtgacgaggcagctgctgtgcggtgccggcaaggtgctgcagacg
ccgcgcggagccgtctactgcgtcagccagcgtgccgagcacatctgggagggcgtctcc
tcggcgacgacccgctcccggccgatcatcaatacgcgcgacgagccgcacgcggacgcc
gagcgctaccgccgcctgcacgtcatcgtgggcgactccaacatgtccgagacgaccatg
ctgctcaaggtcggcgccaccgacctggtgctgcgcatgatcgaggcgggcaccgtgatg
cgcgacctgaccctggagaacccgatccgggcgatccgcgaggtcagccacgacatcacc
ggccggcgcaaggtgcgcctggccagcggccgcgaagcctccgcccttgaggtgcagcgc
gagtactacgagaaggccgtggacttctgcgagcgccgcggcatccgcaccggcaccgtc
gagcaggtcctggagctgtggggccgcacgctggacgcgatcgaggccgaggacctcgac
cgtatcggcaccgagatcgactgggtcatgaagtacaagctcatcgagcggtaccgcagc
aagaacaacatgaccatgtcgcacccgcgggtcgcgcagatagacctcgcctaccacgac
atccaccgccgtcgtggcctgtactacctgctcgagaagaagggtcaggcagcacgcatc
tgcaacgacttgaagatcttcgagggcaagtcggttccgccgcagaccactcgggcccgg
ctgcgcggcgacttcatccggcgagcccaggaacagcgccgtgacttcacggtcgactgg
gttcacctcaagctcaacgaccaggcccagcgcaccgtcttgtgcaaggacccgttccgt
tccgtggacgaccgggtggagaagctgatcgccggaatgtga
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