KEGG   Streptomyces violaceus: RI060_34860
Entry
RI060_34860       CDS       T09385                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
sjn  Streptomyces violaceus
Pathway
sjn03030  DNA replication
sjn03430  Mismatch repair
sjn03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:sjn00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RI060_34860
   03430 Mismatch repair
    RI060_34860
   03440 Homologous recombination
    RI060_34860
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:sjn03032]
    RI060_34860
   03400 DNA repair and recombination proteins [BR:sjn03400]
    RI060_34860
Enzymes [BR:sjn01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RI060_34860
DNA replication proteins [BR:sjn03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RI060_34860
DNA repair and recombination proteins [BR:sjn03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RI060_34860
SSDB
Motif
Pfam: RNase_T
Other DBs
NCBI-ProteinID: WND23956
UniProt: A0ABY9UM09
LinkDB
Position
complement(7616780..7617508)
AA seq 242 aa
MTTCWYEGALAAFDTETTGVDVETDRIVSAAVVVQDAPGVRPRVSRWLVNPGVPVPAEAT
AVHGLTEEHLQRNGRWPAPVMYEIAEVLAEQAHAGRPVVVMNAPFDLTLLDRELRRHRAS
ALDRWFEPAPLLVLDPRVLDKHLDRYRKGRRTLTDLCAHYGVTLEGAHDAAADAAAALEV
TRAVGRRFASRLERLAPGELHTLQAVWHAAQARGLQAWFARSGVEESVDPAWPLRPDLPA
AA
NT seq 729 nt   +upstreamnt  +downstreamnt
atgacgacgtgctggtacgagggggcgctggccgccttcgacacggagacgacgggcgtg
gacgtcgagaccgaccggatcgtgtcggccgccgtcgtcgtccaggacgccccgggcgtc
cggccgcgggtcagccgctggctggtgaacccgggggttccggtgcccgccgaggcgacg
gcggtgcacgggctgacggaggaacacctgcagcgcaacggccggtggccggcgccggtg
atgtacgagatagcggaggtgctggccgagcaggcccacgccggccgcccggtcgtggtg
atgaacgcgccgttcgatctgaccctgctggaccgggaattgcgccgtcatcgcgcctcg
gccctggaccgctggttcgagccggcgccgctgctcgtgctcgacccgagggtcctggac
aagcacctggaccgctaccgcaagggccgccgcacactgaccgacctgtgcgcgcactac
ggcgtcaccctggagggcgcccacgacgcggcggccgatgccgcggcggcgctggaggtc
acccgggcggtgggccgccggttcgcgtcccggctggagcggctcgcccccggtgaactg
cacacactgcaggcggtgtggcacgcggcgcaggccaggggcctccaggcgtggttcgcg
cgcagcggtgtggaggagtcggtcgacccggcctggcccttgcgtcctgacctgcctgcg
gcggcctga

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