Streptomyces janthinus: RI060_36140
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Entry
RI060_36140 CDS
T09385
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
sjn
Streptomyces janthinus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjn03400
]
RI060_36140
DNA repair and recombination proteins [BR:
sjn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RI060_36140
Archaeal homologous recombinant proteins
RI060_36140
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Metallophos_3
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
WND22458
LinkDB
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Position
7898702..7899865
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AA seq
387 aa
AA seq
DB search
MRLLHTSDWHLGRSFHRVNMLGAQAEFIGRLVATVRERAVDAVVVSGDVYDRAVPPLAAV
ELFDDALHRLADLGVPTVMISGNHDSARRLGVGAGLIGRAGIHLRTEPSAAGTPVVLADA
HGEVACYGLPYLEPALVKDEFGVEKAGHEAVLAAAMDRVRADLATRATGTRSVVLAHAFV
TGGEPSDSERDITVGGVAAVPAGVFDGVDYVALGHLHGCQTLTDRVRYSGSPLPYSFSEA
GHRKSMWLVDLDADGSVGAERVDCPVPRPLARIRGTLEDLLADPEHARHEESWVEATLTD
PVRPADPMARLTERFPHTLSLVFDPDRTEDDPDVSYARRLAGRSDQQIAEDFVAHVRGAG
PDTHEQGVLRDAFDAVRTDETVREVAR
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
gtgagactgctgcacacatccgactggcacctcggccggtcgttccaccgggtgaacatg
ctcggtgcccaggccgagttcatcggccggctcgtcgcgaccgtgcgggagcgagccgtg
gacgcggtggtcgtgtccggggacgtgtacgaccgggcggtaccgccgctcgccgcggtc
gagctgttcgacgacgccctgcaccgcctcgccgacctcggcgtgccgaccgtgatgatc
tccgggaaccacgactcggcccgccggctgggggtcggcgcgggcctgatcgggcgggcc
ggcatccatctgcggaccgagccgtcggcggccggtaccccggtggtgctggccgacgcc
cacggggaggtcgcctgctacgggctgccgtatctcgaaccggccctggtgaaggacgag
ttcggcgtggagaaggccgggcacgaggccgtgctcgccgccgccatggaccgcgtccgc
gccgacctcgccacccgtgcgaccggcacccgctccgtcgtcctcgcgcacgccttcgtc
accggcggagagcccagcgacagcgaacgggacatcaccgtcggcggcgtggccgcggtg
cccgccggcgtgttcgacggcgtcgactacgtggcgctcgggcatctccacggctgccag
acccttaccgaccgcgtccgctattccggttccccgctgccctactccttctccgaggcc
gggcaccgcaagagcatgtggctcgtcgacctggacgccgacggctcggtcggcgccgag
cgcgtcgactgccccgtgccgcgccccctcgcccggatccggggcacgctggaggacctg
ctcgccgacccggagcacgcgcggcacgaggagtcgtgggtcgaggcgacactcaccgac
ccggtccgcccggccgacccgatggcccggctcaccgagcgcttcccgcacacgctcagc
ctcgtcttcgatcccgaccgcaccgaggacgaccccgacgtgtcgtacgcccggcgcctc
gccggccgcagcgaccagcagatcgccgaggacttcgtcgcccacgtgcgcggcgccgga
cccgacacccacgaacagggcgtgctgcgggacgcgttcgacgcggtccggaccgacgag
accgtacgggaggtggcccggtga
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