Streptomyces violaceus: RI060_39040
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Entry
RI060_39040 CDS
T09385
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sjn
Streptomyces violaceus
Pathway
sjn00260
Glycine, serine and threonine metabolism
sjn00460
Cyanoamino acid metabolism
sjn00630
Glyoxylate and dicarboxylate metabolism
sjn00670
One carbon pool by folate
sjn00680
Methane metabolism
sjn01100
Metabolic pathways
sjn01110
Biosynthesis of secondary metabolites
sjn01120
Microbial metabolism in diverse environments
sjn01200
Carbon metabolism
sjn01230
Biosynthesis of amino acids
sjn01240
Biosynthesis of cofactors
sjn04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RI060_39040 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RI060_39040 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RI060_39040 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RI060_39040 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RI060_39040 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RI060_39040 (glyA)
Enzymes [BR:
sjn01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RI060_39040 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
WND22980
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Position
8534430..8535713
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AA seq
427 aa
AA seq
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MNALNTPLAELDPEVHAALRAELHRQQSTLEMIASENFAPSAVMEAQGSVATNKYAEGYP
GRRYYGGCEHVDVTERLAIERIKSLFGAGFANVQPHSGAQANTAVFFALLQPGDTVLGLD
LAHGGHLTHGMRINYSGKMLNIVPYHVSEADNLVDMDEVELLAKEHRPKMIIAGWSAYPR
QLDFAEFRRIADDVGALLMVDMAHFAGLVAAGLHPNPVPHAHVTTTTTHKTLGGPRGGVI
LTNEADLAKKINSAVFPGMQGGPLEHVIAAKAVSFKVAASPEFAERQARTLAGSRVLAER
LTRADAAAAGVKVLTGGTDVHLVLVDLRDSELDGRQAEDLLHEIGITVNRNAVPFDPRPP
MVTSGLRIGTPALATRGFTEADFAEVADVIALALQPEPDVPALRARTEALAAKHPLYPHL
SEDGDAR
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcgctgaacacccccctggcggagctggaccccgaggtccacgccgcgctccgc
gccgaactgcaccgccagcagtccaccctggagatgatcgcctccgagaacttcgcgccc
tccgccgtgatggaggcccagggctcggtcgcgaccaacaagtacgccgagggctacccg
ggccgccgctactacggcggatgcgaacacgtcgacgtcaccgagcggctggccatcgag
cggatcaagtccctcttcggcgcgggcttcgccaacgtgcagccgcactcgggcgcccag
gcgaacaccgccgtcttcttcgccctgctccagcccggcgacaccgtcctcggcctcgac
ctcgcgcacggcgggcacctcacgcacggcatgcgcatcaactacagcggcaagatgctc
aacatcgtgccgtaccacgtgtccgaggcggacaacctcgtcgacatggacgaggtcgag
ctactcgccaaggaacaccgccccaagatgatcatcgcgggctggtcggcgtacccgagg
cagctggacttcgcggagttccgcaggatcgccgacgacgtgggtgccctgctgatggtc
gacatggcgcacttcgcggggctggtggcggcgggcctgcaccccaaccccgtaccgcac
gcccacgtcaccaccaccacgacccacaagacactcggcggcccgcgcggcggcgtcatc
ctcaccaacgaggccgacctcgccaagaagatcaactctgcggtcttccccggcatgcag
ggcggccctctggagcacgtcatcgccgcgaaggcggtgtcgttcaaggtcgccgcgtcg
cccgagttcgccgagcgccaggcccgtacgctcgccggctcccgtgtcctcgccgaacgc
ctcacccgggcggacgcggcggcggccggggtgaaggtcctgaccggaggcacggacgtc
cacttggtcctggtcgacctgcgcgactcggaactcgacggccggcaggccgaggacctg
ctccacgagatcggcatcaccgtcaaccgcaacgccgtgcccttcgacccgcgcccgccc
atggtcacctcgggcctgcgcatcggcaccccggcactggccacccgcggcttcaccgag
gcggacttcgccgaggtggcggacgtgatcgccctagccctccagccggagccggacgtg
cccgccctgcgcgcccgcacggaggccctggccgccaagcacccgctctacccgcacctg
tccgaggacggagacgcccgatga
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