Streptomyces janthinus: RI060_40185
Help
Entry
RI060_40185 CDS
T09385
Name
(GenBank) glycoside hydrolase N-terminal domain-containing protein
KO
K15923
alpha-L-fucosidase 2 [EC:
3.2.1.51
]
Organism
sjn
Streptomyces janthinus
Pathway
sjn00511
Other glycan degradation
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
RI060_40185
Enzymes [BR:
sjn01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.51 alpha-L-fucosidase
RI060_40185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_95_cat
Glyco_hyd_65N_2
F5_F8_type_C
Glyco_hydro_95_C
F5_F8_type_C_2
Sad1_UNC
Glyco_hydro_65N
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
WND23181
LinkDB
All DBs
Position
8790286..8793495
Genome browser
AA seq
1069 aa
AA seq
DB search
MVNESQPQRRSVLKVGGGLAFAPLLAQLTGGTPVVQGVAAAADAPAAVQWPTLSREALTY
SVPALDWQSQALPIGNGRLGAMLFADPYEERIQFNEQSLWGGVNNYDNALAGKPDSEFDT
GMTGFGSYRNFGDVVVTFAPRARPKVTAPGGPYSSSSSEGVDKTYDGDSGTKWCIEGPGS
KVRWQVELPEPVAVASYRLTSADDVPQRDPQEWTFAGSADGDTWTTLDRRTLEAPFESRF
QTKEFTCADPAAYRFYRFDFVPKAGVSHFQVSEIGLSGVDLGAGGALYLSSPSGHSKGSG
AGTGSRVTDISSSVDGDPATVWRVDAPAPAVVWQAELPRAVVVTSYALTAAPGRPKDDPR
RWRLEASQDGTAWTTLDTQDPSAPFAGRGETRTIRITNGTAYRVYRLTLTPGASSTGFQI
AGIALEGRGFDTRTQRTVVDYRRTLDFVEGVHATRFGAPGRRVLREAFASRSADVMVFRY
TSDRAHGLSGAISLTSGQDNTPTTVDAGARRIAFSGVMGNGLKHACTVQALHTDGDVRAD
GSTLRFSGCTTLTLLLDARTDYKLDAAAGWRGPGPETGIARALGKAASRSYDELREKHIA
ETRALMSRVSVDWGTSDAAVVALPTDARLARYAAGGADPTLEQGMFDYGRYLLVSSSRPN
GLPANLQGLWNDSNQPAWASDYHTNINVQMNYWGAETTNLPECHEALVRFIEQVAVPSRV
ATRNAFGEDTRGWTARTSQSVFGGNAWEWNTVASAWYAQHLYEHWAFTQDLGYLRTLAYP
MIKEICEFWEDHLKEREDGLLVAPNGWSPEHGPREDGVMYDQQIIWDLFQNYLDCEAVLE
ADPVYRAKVADLQARLAPNKIGKWGQLQEWQEDIDSPTDIHRHTSHLFAVYPGRQITPTN
PEFAAAALVSLKARCGEKKGVPFTAATVSGDSRRSWTWPWRAALFARLGDGHRAQIMLRG
LLTYNTLPNLFCDHPPFQMDGNFGISGAVAEMLLQSHDGVIHLLPALPDDWKAKGSFSGL
RARGGYEVGCEWRDGKVTSYSITADRARNRRKVTLRVNGIEKKVKPSKP
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaatgaatcccaaccgcagcgacgcagcgttctcaaggtcggcggcggcctcgcc
ttcgcacctctgctcgctcagctgaccggcggaactcccgtggtgcagggcgttgccgcc
gcggccgacgcaccggcggccgtccagtggccgaccctgtcgcgcgaggcactgacgtac
tccgtacccgccctggactggcagtcgcaggccctgccgatcggcaacggccggctcggc
gccatgctcttcgccgatccctacgaggagcgcatccagttcaacgaacagagcctgtgg
ggcggcgtcaacaactacgacaacgctctcgcgggcaagccggacagcgagttcgacacc
ggcatgaccggcttcggttcgtaccggaacttcggcgacgtcgtcgtcaccttcgctccc
cgtgcgcgtccgaaggtcacggctccggggggaccgtacagcagctcttcctcggagggt
gtcgacaagacgtacgacggcgactcgggcaccaagtggtgcatcgaggggcccggttcg
aaggtgcggtggcaggtcgagcttcccgaacccgtcgcggtcgcgtcctaccgtctgacg
agtgccgacgacgtgccgcagcgcgacccgcaggagtggacgttcgccggttccgccgac
ggcgacacctggaccacgctcgacagacgcactctggaagcgcccttcgaaagccgcttc
cagacgaaggaattcacctgtgccgaccccgcggcctaccgcttctaccggttcgacttc
gtccccaaggccggtgtcagccactttcaggtgagcgagatcggtctgtccggcgtcgac
ctcggcgcgggcggcgcgctgtacctgtcgtcgccgagcgggcactccaagggctccggc
gccgggaccgggtcccgggtcacggacatctcgagttcggtggacggcgatccggccacg
gtctggcgggtcgacgcccccgcaccagcggtcgtctggcaggccgagctgccccgcgcg
gtcgtcgtcacctcgtacgcgctgacggcggcaccgggacgtccgaaggacgacccccgg
cgatggcggctcgaggcatcgcaggacgggaccgcctggacgaccctcgacacgcaggac
ccctcagcgcccttcgccggccgtggcgagacccggacgatccggatcaccaacggcacg
gcctaccgcgtctaccggctcaccctgacccccggcgcgtcgtccaccggcttccagatc
gcggggatcgcgctggaaggcaggggcttcgacacgcgcacgcagcggacagtcgtcgac
taccggcgcaccctcgacttcgtcgagggagtgcacgccacccgcttcggcgcgccggga
cgacgggtcctgcgggaggctttcgcgagccgttccgcggacgtcatggtcttccgctac
acctcggaccgagcccatggactctccggagcgatatcgctgacgtccggacaggacaac
actccgacgaccgtcgacgccggcgcccgtcgcatcgccttcagcggtgtcatgggcaac
ggtctcaagcacgcgtgcaccgtccaggccctacacaccgacggcgacgtccgggccgac
ggatcgacgctccgcttcagcggttgcaccaccctgaccctgctcctggacgcccgcacc
gactacaagctcgacgccgccgccgggtggcgcggacccggtccggaaacgggcatcgcc
agggcgctcggcaaggctgcctcccggtcctacgacgagctgcgcgagaagcacatcgcc
gagacgcgcgccctcatgagccgcgtctcggtcgactggggcacctccgacgccgccgtc
gtcgctctgccgaccgacgcccggctggcgcgctacgcggcgggcggggcggacccgacg
ctcgagcaggggatgttcgactacggccgctatctgctggtcagttcctcgcgcccgaac
ggtctgcccgccaacctccagggcctctggaacgacagcaaccagccggcgtgggcctcc
gactaccacaccaacatcaatgtccagatgaactactggggagccgagacgacgaacctg
ccggagtgccatgaggcactcgtccggttcatcgagcaggtggcggtgcccagccgcgtg
gcgacccgcaacgccttcggcgaggacacgcgcggctggaccgcccgcaccagccagagc
gtcttcggcggcaacgcgtgggagtggaacaccgtcgcgagcgcctggtacgcccaacac
ctgtacgaacactgggcgttcacccaggacctgggctacctccgcaccctcgcctacccg
atgatcaaggagatctgcgagttctgggaggaccatctcaaggagcgcgaggacgggctc
ctcgtcgcaccgaacggctggtcacccgagcacgggccgcgcgaggacggcgtcatgtac
gaccagcagatcatctgggacctgttccagaactacctcgactgcgaggcggtgctcgag
gcggaccccgtctaccgggccaaggtcgcggacctgcaggcgcgcctcgcgccgaacaag
ataggcaagtggggtcagctgcaggagtggcaggaggacatcgacagccccaccgacatc
caccgccacacctcgcacctcttcgcggtctacccggggcgccagatcaccccgacaaat
cccgagttcgcggccgccgccctcgtctccctcaaggcgcggtgcggcgagaagaagggc
gtgcccttcacggccgcgacggtttcgggcgacagccgccgctcgtggacctggccctgg
cgggcggctctgttcgcccgactgggagatgggcatcgcgcccagatcatgctgcgcgga
ctgttgacctacaacacgctgcccaacctgttctgcgaccacccgcccttccagatggac
ggcaacttcggtatctcgggcgctgtcgcggagatgctcctgcagagccacgacggcgtc
atccacctgctgcccgccctgccggacgactggaaggccaagggctccttcagcggactc
cgtgcccgtggcggctacgaggtcggctgcgagtggcgggacgggaaggtcacgtcgtac
agcatcaccgccgaccgggcgcggaaccggaggaaggtcaccctgcgggtgaacggcatc
gagaagaaggtgaagccgagcaagccctga
DBGET
integrated database retrieval system
