Streptomyces violaceus: RI060_40810
Help
Entry
RI060_40810 CDS
T09385
Name
(GenBank) RNA polymerase sigma factor SigF
KO
K03090
RNA polymerase sigma-B factor
Organism
sjn
Streptomyces violaceus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjn03021
]
RI060_40810
Transcription machinery [BR:
sjn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RI060_40810
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
KORA
HTH_23
HTH_Crp_2
HTH_38
GerE
MarR
MarR_2
Sigma70_ECF
IF2_N
Motif
Other DBs
NCBI-ProteinID:
WND23295
UniProt:
A0ABY9UNF4
LinkDB
All DBs
Position
complement(8926761..8927645)
Genome browser
AA seq
294 aa
AA seq
DB search
METAVIRSKAEVAGESAEAGTGDGALPVVDPRSVAPRDARALSRQFFQRLTELEEGTHEY
QYARNTLIEMNMSLVRFAAGRFRGRGDDMEDIVQTGMIGLIKAIDRFELSREVEFTSFAL
PYIVGEIKRFFRDTTWAVHVPRRLQELRVELAKAREELASRLDREPTVAELATLMNISEN
EVVEGQIAANGYNSSSLDAALTGDGPEGGEAVLADFIGVEEDGLRLVEDFHSLAPLMAEL
SERDRQIIHMRFVEEATQAEIGEELGCSQMHVSRLIKRIITRLREGMLGELGCA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgccgtgatccggtcaaaggcagaagtcgccggggagagcgccgaggccgga
acaggcgacggagcactgccggtcgtggacccgcggtccgtggccccgcgggacgccagg
gcgctgtcccgccagttcttccagcgtctgacggaactcgaagaaggcacgcacgagtac
cagtacgcgcgcaacacactgatcgagatgaacatgtcgctcgtgcggttcgcggccggc
cggttccggggccgcggcgacgacatggaggacatcgtccagaccggcatgatcggcctg
atcaaggccatcgaccggttcgagctgtcgcgcgaggtcgagttcacctccttcgcgctg
ccgtacatcgtcggtgagatcaagcggttcttccgtgacacgacgtgggcggtgcatgtg
ccgcggcggctgcaggagctgcgcgtggagctggccaaggcccgcgaggaactcgccagc
cggctggaccgcgagccgaccgtcgccgagctggccacgctgatgaacatctccgagaac
gaggtcgtcgaggggcagatcgccgcgaacgggtacaactcgtcgtcgctggacgccgcg
ctcaccggcgacgggccggagggcggcgaggcggtcctggccgacttcatcggcgtcgag
gaggacgggctgcggctcgtcgaggacttccactcgctcgccccgctcatggcggagctc
agcgagcgcgaccggcagatcatccacatgcggttcgtggaggaggccacccaggcggag
atcggcgaggaactcggctgctcgcagatgcacgtctcgcgtctgatcaagcggatcatc
acccggctgcgcgagggcatgctgggcgagctcggctgcgcctga
DBGET
integrated database retrieval system
