Streptomyces violaceus: RI060_41070
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Entry
RI060_41070 CDS
T09385
Name
(GenBank) SigB/SigF/SigG family RNA polymerase sigma factor
KO
K03090
RNA polymerase sigma-B factor
Organism
sjn
Streptomyces violaceus
Brite
KEGG Orthology (KO) [BR:
sjn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjn03021
]
RI060_41070
Transcription machinery [BR:
sjn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
RI060_41070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
HTH_Crp_2
MarR_2
KORA
HTH_24
HTH_3
DUF7343
DUF4423
HTH_AsnC-type
MarR
Sigma70_ECF
GerE
Motif
Other DBs
NCBI-ProteinID:
WND23340
UniProt:
A0ABY9UNJ1
LinkDB
All DBs
Position
8978084..8978947
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AA seq
287 aa
AA seq
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MLIDTPTNGTGTAGTTTTAARRRHDDAPDTADLFTRMAELEEGPEREAVRDELVALWLPM
AHRIAGRFRDRGESLEDLKQVAALGLVKAVDRFDPSRGAFESYAVPTITGEVKRHFRDRM
WALRVPRRVQELRNKVRVARRELTQNPGSPEPSVTDLAARTGLTEEEVGAGLEALESFST
LSLDAELSADDDGYSLADTLGAADASYDVVVDRESAKEGLRRLPERERAILYMRFFEDMT
QSRIADRLGISQMHVSRLISRSCARVRDEAMGQRTGARDGGSTSTTA
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgctcatcgacacgcccacgaacggaaccggcacggccggaacgacgaccaccgccgcc
cggcggcggcacgacgacgcaccggacaccgcggacctcttcacccggatggcggaactg
gaggagggtcccgagcgggaggccgtccgcgacgagctcgtcgcgctctggctgcccatg
gcccaccgcatcgccggccgcttccgcgaccgcggagagtcgctggaggatctgaagcag
gtcgcggctctcgggctggtcaaggccgtcgaccggttcgacccgagccggggagccttc
gagagctacgccgtccccaccatcaccggcgaggtcaagcggcatttccgggaccggatg
tgggctctgcgggtcccccgccgggtgcaggaactgcgcaacaaggtgcgggtggcacgc
cgtgaactcacccagaacccgggcagccccgagccctccgtgacggacctcgccgcccgt
accggcctgaccgaggaagaggtcggtgccgggctcgaagcgctggagagcttcagcacc
ctgtcgctggacgccgagctctcggccgacgacgacggctacagcctcgcggacaccctc
ggcgcggcggacgcctcctacgacgtcgtggtcgaccgcgagtccgccaaggaaggcctg
cgccgcctgccggaacgtgaacgggccatcctctacatgcgcttcttcgaggacatgacg
caaagccgcatcgccgaccgcctcggcatctcccagatgcacgtctcccgcctcatcagc
cgcagttgcgcccgcgtgcgcgacgaggccatggggcagcggacgggcgcccgggacggc
ggcagcacctccacgacggcctga
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