Sphingobium indicum UT26S: SJA_C1-00050
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Entry
SJA_C1-00050 CDS
T01201
Symbol
dnaQ
Name
(GenBank) DNA polymerase III epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp03030
DNA replication
sjp03430
Mismatch repair
sjp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SJA_C1-00050 (dnaQ)
03430 Mismatch repair
SJA_C1-00050 (dnaQ)
03440 Homologous recombination
SJA_C1-00050 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sjp03032
]
SJA_C1-00050 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-00050 (dnaQ)
Enzymes [BR:
sjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SJA_C1-00050 (dnaQ)
DNA replication proteins [BR:
sjp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SJA_C1-00050 (dnaQ)
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SJA_C1-00050 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DNA_pol_A_exo1
Rv2179c-like
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
BAI94839
UniProt:
D4YWV7
LinkDB
All DBs
Position
1:3036..3728
Genome browser
AA seq
230 aa
AA seq
DB search
MREIIFDTETTGFDPASGDRLVEIGCIELLNRVPTGRTFHAYYNPQRSMPAAAEAVHGLS
DSFLRDKPLFSHGVEELLAFLEDSHLVAHNARFDFGFLNHELRLCGLPEVSMARMIDTVA
IARQLHPGAKHSLDALCTRYGIDRSHRIKHGALLDAELLAQLYIELTGGRQIGLGLAQEE
EKRVANMELAAEVAVRPVRPARVFAASAEELERHAAFVATLEKPLWLEEA
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgagatcattttcgacaccgaaacgacgggattcgacccagcttccggagatcgc
ctggtcgaaatcggatgcatcgaacttctcaaccgggttcccacgggccgcacattccac
gcttattacaatccgcaacggtccatgccggccgcggcggaggcggtgcacggcctgtcc
gacagcttcctgagggacaagccgctgttttcccatggggtggaggaactgctcgccttt
ctggaggacagccatctggtcgcgcacaatgcgcgcttcgacttcggcttcctcaaccac
gaattgaggctgtgcggattgcccgaagtgtcgatggcgcggatgatcgacaccgttgcc
atagcgcggcagcttcaccccggcgccaagcacagcctggacgcgctctgcacccgatac
ggcatcgaccgcagccaccgcatcaagcatggcgcgctgctcgacgccgaattgctggcc
cagctttacatcgagttgaccggcggccgtcagatcggcctcggtcttgcacaggaggaa
gagaaacgcgttgcaaatatggaacttgcggcggaagtcgcggttcgccctgttcgtccc
gcgcgcgtctttgcggcaagcgcggaggagctggagaggcatgcagcgttcgtcgcgacg
ctggaaaagccgctctggcttgaggaggcctga
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