KEGG   Sphingobium indicum UT26S: SJA_C1-00170
Entry
SJA_C1-00170      CDS       T01201                                 
Symbol
lhr
Name
(GenBank) Lhr-like helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
sjp  Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:sjp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sjp03400]
    SJA_C1-00170 (lhr)
Enzymes [BR:sjp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     SJA_C1-00170 (lhr)
    5.6.2.6  RNA 3'-5' helicase
     SJA_C1-00170 (lhr)
DNA repair and recombination proteins [BR:sjp03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    SJA_C1-00170 (lhr)
SSDB
Motif
Pfam: DEAD_assoc WH_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 T4SS-DNA_transf
Other DBs
NCBI-ProteinID: BAI94851
UniProt: D4YWW9
LinkDB
Position
1:complement(13582..15993)
AA seq 803 aa
MNQRLPEPLEQWFTSRGWTPRRHQTDMLAAARSGDHALLVAPTGAGKTLAGFLPTLTDLI
ENPGEGLHTLYVSPLKALAVDVRRNLLTPIEEMDLPIRVETRTGDTPSDRKARQRARPPQ
ILLTTPESLSLLLSYADSFLMFAGLKTVIIDEVHAFATQKRGDILNLSLSRLQSINPGLR
RVALSATVADVDAYRAWLAPDGDIGAVTPVMGEAGADPHVAILIPDGRIPWSGHSGKYAA
KQVMEEIERRATTLVFCNTRGLAELIFQSLWSVNEANLPIAIHHGSLSIEARRKVESAMA
AGKLRALVATASLDLGVDWGNVDCVIQMGAPKGSSRLLQRIGRANHRLDTPSEAILIPGN
RFEYLEARAALDAVEAGERDTDDFRPGSLDVLAQHVMGLACAAPFREEELLAEIRSATPY
GALTEEAFANVLHFIEGGGYALRAYDRFKRLTLGADGLWRVSHPRFVQQHRLNAGIIVDQ
PVLDVRFANGRKLGTVEEGFAATLRPGDSFFFSGIALEAVRMDTTDLVVRATSKQARIPT
WGGTRMAMSTRLADRVRHFLAEPDQWGRFPDDVRDWLEVQKYRSALPEPGQLLIETFPHE
GRHYLVCYSFEGWNAHQSLGMLLTRRMDAQGLMPMGFVSNDYALAVYGLKPVTDPQSLFS
ADILDHEFIQWVEQSSLLKRAFRDVAVISGLIERQHPGKRKTGRQVTFSTDLIYDVLRKY
QPDHLLLKAAWADARARMTDVGRLGDLIDRASATMLHVDLDRVSPLAVPVLILIGREQVA
QHAVEDALLIEAEALVAEAMRPD
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgaaccaacgcctacccgaaccgctggagcaatggttcacatcccgcggctggacgccc
cgtcgccaccagaccgacatgctggccgccgcccgatccggcgatcacgcgctgctcgtc
gctcctaccggcgcgggcaagacgctggccggtttcctgcccaccctcaccgacctgatc
gaaaatccgggcgaaggcctccacaccctctatgtctcgccgctcaaggcccttgccgtc
gacgtccgccgcaacctcctcacccctatcgaggaaatggacctgccgatccgcgtggag
acccgcaccggcgacaccccctccgaccgcaaggcccgccaacgcgcgcgcccgccccag
attctgctcacgacgcccgaatccctctcgctgctgctgagctatgccgacagtttcctg
atgtttgcggggctgaagaccgtcatcatcgacgaggtccacgccttcgccacccagaag
cgcggcgacatcctcaacctttcgctgtcccggctccagagcatcaaccccggccttcgc
cgcgtcgccctgtccgccacggtcgcggatgtcgacgcctatcgcgcctggctggccccg
gacggcgacatcggcgccgtcacccccgtcatgggcgaggcgggcgccgatccccatgtc
gccatcctgatccccgacggacgcattccctggtccggccattccggcaaatatgccgcc
aaacaggtgatggaggaaattgagcgccgcgccaccacgctggtcttctgcaacacgcgg
gggctggccgaactcatcttccagtccctctggtcggtgaacgaggcgaacctgcccatc
gccatccaccatggcagcctgtcgatcgaggcgcggcggaaggtcgaatcggcgatggcg
gcgggaaaactccgcgccctggtcgccaccgcctcgctcgacctgggcgtcgactggggc
aatgtcgactgcgtgatccagatgggcgcgcccaagggcagttcccgcctgctccagcgc
atcggccgcgccaatcaccgcctcgacacgcccagcgaggcgatcctcatccccggcaac
cgcttcgaatatctggaggcccgcgccgcgctggacgcggtcgaggcgggcgagcgcgac
accgacgatttccgccccggcagcctcgacgtcctcgcccagcatgtcatgggcctcgcc
tgcgccgcgcccttccgcgaggaggaactgctggccgaaatccgctccgccactccctat
ggcgcgctgacggaggaagccttcgccaatgtcctccatttcatcgaaggcggcggctat
gccctgcgcgcctatgaccgattcaagcggctgacgcttggcgccgacggcctgtggcgc
gtctcccatccccgcttcgtccagcagcaccgcctgaatgcgggcatcatcgtcgaccag
ccggtgctggacgtccgcttcgccaacggccggaaactgggcacggtggaggaggggttc
gccgccacgctccgccccggcgacagcttcttcttttccggcatcgcgctggaggcggtg
cggatggacacgaccgaccttgtcgtccgcgccacgtccaaacaggcgcgcatccccacc
tggggcggcacccgcatggcgatgtcgacgcgcctcgccgaccgggtccgtcatttcctg
gccgaacccgaccagtggggccgcttcccggacgatgtccgcgactggctggaggtgcag
aaatatcgatccgccctgcccgaacctgggcaattgctgatcgagacctttccccatgag
ggccgccactatctcgtctgctacagtttcgaaggctggaacgcgcaccagtcgctcggc
atgctgctgacccgccgcatggacgcgcagggactgatgccgatgggcttcgtctccaac
gactatgcgctcgccgtctatggcctgaagccggtcacggacccgcaaagcctgttttcg
gccgacatattggatcatgaattcatccaatgggtcgagcaatcgagcctgctcaagcgc
gcctttcgcgacgtggcggtgatctccggcctgatcgagcgccagcatcccggcaagcgc
aagacggggcggcaggtcactttctcgaccgacctcatctacgacgtgctgcgcaaatat
cagcccgaccatctgctgctgaaggccgcctgggccgacgcccgcgcccggatgaccgat
gtgggacggctgggcgacctgatcgaccgcgcatcggccaccatgctgcatgtcgatctc
gaccgggtaagtccgctcgccgtcccggtgctcatcctcatcggacgcgagcaggtcgcc
cagcatgcggtggaggacgccctgctgatagaggctgaagccctggtggcggaggccatg
cgcccggattga

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