Sphingobium indicum UT26S: SJA_C1-00300
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Entry
SJA_C1-00300 CDS
T01201
Symbol
thdF
Name
(GenBank) tRNA modification GTPase
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjp03016
]
SJA_C1-00300 (thdF)
Transfer RNA biogenesis [BR:
sjp03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SJA_C1-00300 (thdF)
Prokaryotic type
Methyltransferases
SJA_C1-00300 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
RsgA_GTPase
Dynamin_N
AAA_28
ABC_tran
AAA_18
AAA_24
Arf
Motif
Other DBs
NCBI-ProteinID:
BAI94864
UniProt:
D4YWY2
LinkDB
All DBs
Position
1:complement(30014..31297)
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AA seq
427 aa
AA seq
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MTETIFALSSGAPPAGIAVVRISGPGAGQALLALAGSLPPARRARLSSLRDPRDGALLDR
ALVLWFPGPDTATGEDLAELHCHGGRAVIAAVEQALASLQGLRRAEAGEFTRRAFANGRM
DLNAVEGLSDLLAAETQQQRRAALLMAEGHFSQRVEQWLRTLLDLSAMTEAALDFSDEDD
VPDHGIETRIGQGVRILAEDVRAVLASPSAERLRDGVRVVLAGPPNAGKSTLLNRLVGRD
AAIVSDVAGTTRDRIEVPAALGGTAFLFTDTAGLRGETGDAIEAIGIDRARGALEAADII
LWLGPADEAPREDAIVIAAQCDRHAKADRPGLPLSAVTGEGMDRLASMLLERAAMLLPGE
GDYALHQRQREGAARLHAHLTSAQGSDDLLIVAEELRQARHAIDLLTGRAGTEDMLDRLF
AGFCIGK
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
gtgacggagaccatctttgccttgtcgagcggcgcgcctcccgccggcatcgccgtcgtg
cggatcagcggaccgggggcggggcaggcgctgctggcgctggccggaagcctgccgccg
gccagacgcgcgcggctgtcctcattgcgcgatccgcgtgacggcgcgttgctggaccgg
gcgctggtcctgtggtttcccggccccgacacggcgaccggcgaagacctggcggaactg
cactgccatggcgggcgcgccgtcatcgccgcggtcgagcaggcgctggcttccctgcaa
ggactgcgccgggccgaggcgggggaattcacgcggcgcgccttcgccaatggccgcatg
gacctgaatgccgtggagggcctgtcggacctgctggcggccgagacgcagcagcagcgc
cgggcggccctgctgatggcggagggtcatttttcgcaaagggtggagcaatggctgcgg
acattgcttgacctgtccgcaatgaccgaggcggcgctcgatttttccgatgaggatgac
gtgccggaccacggcatagaaacgcggatcgggcagggcgttcgcattttggcggaggat
gtccgcgccgtgctcgcctcgccatcggcggagcggctgagggacggcgttcgcgtggtc
ctggcggggccgcccaatgcgggcaaatcgacgctgctcaaccggcttgtggggcgggat
gcggccatcgtctcggacgtggcggggaccacccgtgatcggatcgaggtgcccgccgcg
ctgggcggcaccgcctttctttttacggacacggcgggcctgcgcggtgaaacgggcgat
gccatagaggcgatcggcatcgacagggcacgcggcgcgctggaggcagcggacatcatc
ctctggctcggcccggcggatgaagcgccacgggaagatgcgatagtgatcgctgcccag
tgcgatcgccacgcgaaagcggaccgacccggcctgcccctttccgccgtgacgggggag
gggatggatcgtctcgcctccatgctgctcgaacgggcggccatgctcctgccgggagaa
ggcgactatgccctgcaccagcggcagcgcgaaggcgcggcccggctgcatgcgcatctg
acttccgcgcagggttcggacgatttgctgatcgtcgccgaagagttgcggcaggctcgc
catgcgattgacctgctgacggggcgagccggcacggaggacatgctggaccgcctgttc
gccggattctgcatcggaaaatag
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