Sphingobium indicum UT26S: SJA_C1-00620
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Entry
SJA_C1-00620 CDS
T01201
Symbol
hisS
Name
(GenBank) histidyl-tRNA synthetase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
SJA_C1-00620 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sjp01007
]
SJA_C1-00620 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjp03016
]
SJA_C1-00620 (hisS)
Enzymes [BR:
sjp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
SJA_C1-00620 (hisS)
Amino acid related enzymes [BR:
sjp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
SJA_C1-00620 (hisS)
Transfer RNA biogenesis [BR:
sjp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
SJA_C1-00620 (hisS)
Prokaryotic type
SJA_C1-00620 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
tRNA-synt_2b
tRNA-synt_2d
Motif
Other DBs
NCBI-ProteinID:
BAI94896
UniProt:
D4YX14
LinkDB
All DBs
Position
1:60488..61837
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AA seq
449 aa
AA seq
DB search
MAKIETPRPVRGTQDMLGGTNEAFQERFAHVVATFDRVRRLYGFQRVEVPVFESTAVFAR
SLGESTDVVSKEMYTFEDRGGDSITLRPEFTAGISRAYITEGWQQYAPLKVATHGPLFRY
ERPQKGRFRQFHQLDAEIIGAGEPGADVELLVLADQLLRELGISEGVTLNLNTLGDGPSR
EAWRAALVAHFEAHRDQLSEESIDRLHRNPLRILDSKDPRDRPVADSAPDIDAYLTDEAR
SFFEKVTAGLDAAGVAWERNARLVRGLDYYRHTAFEFITDRLGAQGTVLGGGRYDGLIEN
LGGPSTPAVGWAAGIERLAMLIDVPAVERPKVVVFSEADDLEADIIKVTTALRRAGIPAD
SISGGSRKKRFDKAQSGNPELLFVIRRSPNPRPNWNPIFIDVKRGRASPHEDFLLAEQDA
AAFLNQAMIVVQLDEDEKKFADFGVLLKS
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatcgaaaccccgcgcccggtgcgcggcacgcaggacatgctgggcggcacg
aacgaagcgttccaggaacgcttcgcccatgtcgtcgcgaccttcgaccgggtgcgcagg
ctctacggtttccagcgggtggaagtgcccgtcttcgaatcgacggcggtgttcgcccgc
tcgctgggcgaaagcaccgacgtcgtctccaaggaaatgtacaccttcgaggatcgcggc
ggcgacagcatcaccttgcgcccggaattcaccgcaggcatttcccgcgcctacatcacc
gaaggctggcagcaatatgcgccgctgaaagtcgcgacccacggccctctctttcgctac
gagcgtccgcaaaagggccgcttccgccagttccaccaactcgacgctgaaatcatcggc
gcgggcgagccgggcgcggacgtggaactgctggtgctggccgaccagttgctgcgcgaa
ctgggcatatcggaaggcgtgacgctcaacctcaacacgctgggcgacgggccgagccgc
gaagcctggcgcgccgcgctggtggcgcatttcgaagcgcatcgcgaccagctttccgaa
gagagcatcgaccgcctgcaccgcaatccgctgcgcatcctcgatagcaaagacccgcgt
gatcgcccggtggcggacagcgcgccggacatcgacgcctatctcaccgacgaagcgcgc
agcttcttcgaaaaggtgacggcgggcctcgatgcggcgggcgtggcgtgggaacgcaac
gcccgtctggtgcgcggcctggattattatcgccacactgcgttcgaattcatcaccgac
cggctcggcgcgcagggcacggtgctgggcggcgggcgctatgacgggctgatcgagaat
ctcggcggcccctcgactccggcggtcggctgggcggcggggatcgagcggctggcgatg
ctgatcgatgtacctgcggtagagcgtcccaaggttgttgtgttttcagaggcggacgac
ctcgaagccgacattataaaagtcacaaccgctcttaggcgagcaggtatccctgccgac
tccatttcaggcggttctcgcaagaaacgattcgacaaggcgcaatctggaaatccggaa
cttcttttcgtgattcgaaggtcaccgaatcctcgaccgaattggaatcctattttcatc
gacgtaaagcgtggtcgggcgagtccgcatgaggatttcttgcttgcggagcaggatgct
gcggcatttctcaatcaagcgatgattgttgtgcaactcgacgaagatgagaagaagttc
gctgattttggcgttttgttgaagtcataa
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