Sphingobium indicum UT26S: SJA_C1-02810
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Entry
SJA_C1-02810 CDS
T01201
Symbol
trmU
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SJA_C1-02810 (trmU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjp03016
]
SJA_C1-02810 (trmU)
Enzymes [BR:
sjp01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SJA_C1-02810 (trmU)
Transfer RNA biogenesis [BR:
sjp03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SJA_C1-02810 (trmU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
Asn_synthase
NAD_synthase
QueC
Arginosuc_synth
ATP_bind_3
ThiI
Motif
Other DBs
NCBI-ProteinID:
BAI95115
UniProt:
D4YXN3
LinkDB
All DBs
Position
1:complement(297479..298600)
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AA seq
373 aa
AA seq
DB search
MQPPFQPAQFDLKAPPDARRIVVAMSGGVDSSVVAALAARTGAETIGVTLQLYDHGAAVG
RTGSCCAGQDIRDARAVADRIGIAHYVFDYESRFRDSVIADFADEYMAGRTPIPCVKCNM
GVKFTDLFQIARDLGADCLATGHYVRRVEGPQGAELHRAADSARDQSYFLFATTQAQLDY
LRFPLGGLPKPQVREIAAELGLSVALKPDSQDICFVPDGDYAKIVRKLRPDADEGGDIVH
IDGRLMGTHKGMIHYTVGQRKGLEIGGQAEPLYVVRLDAEARRVIVGPKAALAVSAARLS
DINWLGGDFAGPLTAKVRSMAKPVPARLEGDRLVFDAPEYGVAPGQAAVLYAGDRVLGGG
WIAATEAALAEAA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgcagcccccttttcagcctgcccagttcgatctgaaggctccgcccgatgcgcggcgc
atcgtcgtcgccatgtcgggcggcgtggacagcagcgtcgtcgccgcgctcgcggcgcgc
accggggcggaaaccatcggcgtgacgctccagctttacgatcatggcgcggcggtgggc
cgcacgggaagctgctgcgccgggcaggacatacgcgatgcgcgggcggtcgccgatcgc
atcggcatcgcccattatgtcttcgattatgaaagccggttccgggattcggtgatcgcc
gacttcgccgacgaatatatggccgggcgcacccccattccctgcgtgaaatgcaatatg
ggggtgaagttcaccgacctgttccagatcgcgcgcgacctgggggccgactgcctggcc
accggccattatgttcgccgggtggaagggccgcagggcgccgaactgcaccgcgccgcc
gactcggcgcgggaccagagctatttcctcttcgccacgacccaggcgcagttggactat
ctgcgcttcccgctgggcggcctgcccaagccgcaggtgcgggagatcgcggcggaactg
ggcctgtcggtcgccttgaagccggacagccaggacatctgcttcgtgcccgacggcgac
tatgcgaagatcgtgcgcaagctgcgccccgacgcggacgagggcggcgacatcgtccat
atcgacggccgcctgatgggcacccacaaggggatgatccactataccgtcggccagcgc
aaaggtctggagatcggcggccaggccgagccgctctacgtcgtgcggctggacgcggag
gcgcgccgcgtgatcgtcgggccgaaggcggcgctggcggtgtcggcggcgcggctgagc
gacatcaactggctgggcggggattttgccggacccttgacggccaaggtccgctccatg
gcgaaacccgtgcccgcccggctggagggggaccggctggtcttcgacgcgcccgaatat
ggcgtcgcgccggggcaggcggcggtgctctatgcgggcgaccgggtgctgggcggcggc
tggatcgcggcgaccgaggcggcgctggcggaggcggcgtag
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