Sphingobium indicum UT26S: SJA_C1-04070
Help
Entry
SJA_C1-04070 CDS
T01201
Symbol
ybjD
Name
(GenBank) putative ATP-dependent endonuclease of the OLD family
KO
K07459
putative ATP-dependent endonuclease of the OLD family
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
SJA_C1-04070 (ybjD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_15
OLD-like_TOPRIM
AAA_21
DUF2813
AAA_23
SMC_N
AAA_29
ABC_tran
FtsK_SpoIIIE
AAA_27
Motif
Other DBs
NCBI-ProteinID:
BAI95241
UniProt:
D4YY09
LinkDB
All DBs
Position
1:complement(418940..420730)
Genome browser
AA seq
596 aa
AA seq
DB search
MTVRISRVKISNFANFSEINLETGENIVIVGENKVGKSNFIRALQLILDPGLSERDRQLG
LEHFWDGLGEDKLGETVEIAVELTDFTDDPRLMAHLNDCVVDPGPPMVARLTYRFQPKAN
LDRDPESLADYEYIIFGGDDPEMSIGPSLRRMLPLDVQVALRDAEKDLASWRNSPLRPLI
EELATSLDADARAEIQEQVNEAQAELEGHAEVVATAERISERLIAIAGEQHAVPLTLGLS
PTRVDALLRSLRLLIDNGARGIADASLGTANLIFMALKSLELDRLVTDGERDHTFFVVEE
PEAHLHPHVQRLVYRYFLGTGADGEEDTPPLTTILTTHSPHIASVTPIRSIVLLRHDAET
NATIAVSTATAPFTERDEADLQRYIDVSRGEIFFARGVILVEGDAERFLVPAFADALDIP
LDMLGITVCSVSGTNFTPYVKLLGPHGLNIPHVILTDRDPNGASHPRVRRRLISVLQLRE
EGVSYRRLDADAVIARAEPFGYFVNSNTLEPELFTGGLAEGMQEVIEEELSIGDGTREEL
QGWVDDPDTLDEDALIALIERVGKGRFAQALARHVDVDTCPDYIRQALEHIRDAVA
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgcggatttcgcgcgtaaagataagcaacttcgcgaacttctcggagatcaac
ctcgagacgggcgagaacatcgtcatcgtcggtgagaacaaagtcggcaaaagcaatttc
atccgcgcgctgcaactgattctcgacccgggcctgtccgagcgtgatcgccagctcggc
ctggagcacttctgggatgggttaggcgaggacaagctcggggaaacggttgagatcgcc
gtcgagctgaccgacttcaccgacgatccgcgattgatggcgcatctgaatgactgcgtg
gtcgatccagggccgccgatggtcgcgcggcttacctaccgctttcagccgaaggccaat
ctcgatcgggatccggagagcctagccgactatgagtacatcatctttggcggtgacgac
cccgagatgtccatcgggccgtcgctacggcgaatgctgccgctcgacgtgcaggttgcg
ctgcgcgatgccgagaaggatctggcgagctggcgcaactcgccgctaaggccattgatt
gaggagcttgcaacctccctggacgcggatgctcgcgcggaaattcaggagcaggtgaac
gaggcgcaggcggagttggagggccatgccgaagtggtcgccacggcagagcggatcagc
gagcggctgatcgccatcgcgggcgagcagcatgcggtcccgctgacgctcggtctttcg
ccgacacgggtcgacgccttgctgcgcagcctgcgcctgctgatcgacaatggagcccgc
ggcattgccgacgccagtcttggcacggccaatctgattttcatggcgctgaagagtctc
gagctcgatcggctcgtaacggacggtgaacgcgaccacaccttcttcgtcgtcgaagag
ccggaggcgcacctgcatccgcacgttcagcgccttgtctatcgctacttcctcggcacg
ggcgcagacggagaggaggatacgccgccgctgacgacgatcctcacgacgcattcacct
cacatcgccagcgtcacgccgatccgctcgatcgtcttgctccgccatgacgcggagacg
aatgcgacgatcgccgtctcgacggccactgcgccgtttaccgagcgcgatgaggcggac
cttcagcgctacattgatgtgagccgcggcgagatcttcttcgcccgcggtgtcatcctg
gtcgagggcgacgcggagcggttcctggtgccggcctttgccgacgcgctagatatcccg
ctcgacatgctcggcatcacggtctgttcggtcagcggcacgaatttcacgccctacgtg
aagctgctaggcccgcacggcctgaacattccgcacgtgatcctgacggaccgcgacccc
aatggcgccagccatccgcgggttcggcgtcgcctgatcagtgtgctgcaattgcgggaa
gaaggcgtcagctacaggcgtctcgacgcggacgctgtaatcgcccgcgccgagccgttc
ggttacttcgtcaacagcaacacgctggaaccggagctgtttaccggcggccttgccgag
ggcatgcaggaggtgatcgaagaagaattgagcatcggcgacggcacccgcgaggagctg
caagggtgggtggatgaccccgatacgctcgacgaggatgcgctgattgcgctcatcgaa
cgggtcggcaagggtcgttttgcccaggcgctcgcccgccacgtcgacgtggatacatgt
ccggactacatccggcaggcgctggagcacatccgcgatgccgttgcgtag
DBGET
integrated database retrieval system
