Sphingobium indicum UT26S: SJA_C1-04890
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Entry
SJA_C1-04890 CDS
T01201
Symbol
rpoE
Name
(GenBank) ECF-type sigma factor
KO
K24073
RNA polymerase sigma factor CnrH
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjp03021
]
SJA_C1-04890 (rpoE)
Transcription machinery [BR:
sjp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SJA_C1-04890 (rpoE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_1
PhyR_sigma-like
Cas9_b_hairpin
DUF134
HTH_10
Motif
Other DBs
NCBI-ProteinID:
BAI95323
UniProt:
D4YY91
LinkDB
All DBs
Position
1:493949..494515
Genome browser
AA seq
188 aa
AA seq
DB search
MTASLPDCSDGELAALALGGRQAAYGELVRRHQGWVHRLVRSHVGSMDEALDVTQASFVA
AFAALNRYDVTRPFQVWMSRIVINKCHDWRRRRAVRNFFSMALPLGEADDVADEAPLPDQ
AIGAEQQLAEAMKAIAALPASLKDTLILRTIDEKSEAETAEILGISQKAVETRLYRARAR
LAEMLKKV
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgaccgcgagcctccccgactgctcggacggggagcttgcggctttggcgcttggcggg
cggcaagcggcttatggcgaactggtccggcggcatcaaggttgggttcaccggctcgtg
cgcagccatgtcggatctatggatgaggccttagatgtcacccaggcgagcttcgtcgcg
gcctttgccgcactcaaccgctatgacgtaacccgacccttccaggtctggatgtcccgg
atcgtcatcaacaaatgccatgactggcggcgccggcgcgcggtccgaaacttcttctcc
atggccctgccgctgggcgaggcggatgacgtcgccgatgaggcgccgctacccgaccag
gcaatcggcgccgagcagcagctggcagaggcgatgaaggcgatcgccgccctgcccgcc
tctctcaaggacacgctcatcctgcggacgatcgacgagaaatcggaagccgaaaccgcc
gagattctcggcatcagccagaaggcagtcgagactcgcctctaccgcgcccgcgcacgc
ctcgcagaaatgttgaagaaagtttga
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