Sphingobium indicum UT26S: SJA_C1-05790
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Entry
SJA_C1-05790 CDS
T01201
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SJA_C1-05790 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjp03021
]
SJA_C1-05790 (rpoA)
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-05790 (rpoA)
Enzymes [BR:
sjp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SJA_C1-05790 (rpoA)
Transcription machinery [BR:
sjp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SJA_C1-05790 (rpoA)
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SJA_C1-05790 (rpoA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
HHH_XRCC3_RpoA
TmoB
IDH
Motif
Other DBs
NCBI-ProteinID:
BAI95413
UniProt:
D4YYI1
LinkDB
All DBs
Position
1:complement(590298..591362)
Genome browser
AA seq
354 aa
AA seq
DB search
MTVNMKNWQELKKPNSLEIKVAGDGRRKATFVAEPLERGFGLTLGNALRRVLLSSLQGAA
VTSIKIENVLHEFSSLAGVREDVTDIVLNIKQVALRMEGDGPRRLQLSATGPAEVRAGDI
TTVGDIEVMNPDLVICHLDQGATLNMELTADVGKGYVPAVANRPADAPIGLIPIDALYSP
VRQVAYKVDNTRVGQELDYDKLSLTVETDGTVTPEDAVAYAARILQDQLQLFVHFEDALP
AAAPAAGAAAGGSASEGESDANQINRYLLKKVDELELSVRSANCLKNDNIIYIGDLVQKT
EAEMLRTPNFGRKSLNEIKEVLSSMGLRLGMDIPGWPPENIEEMAKKLEQELLG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgactgtcaacatgaagaactggcaggaattgaagaagcccaacagccttgaaatcaag
gtcgcgggcgacggcaggcgcaaggcgaccttcgtcgccgaacctctggagcgcggcttc
ggcctgacgctcggcaatgcgctgcgccgggttcttctgtcctcgctccagggcgcggcg
gtcacctcgatcaagatcgagaacgtcctgcacgaattctcctcgctcgcaggcgtgcgc
gaagatgtgacggacatcgtcctcaacatcaagcaggtcgcgctcaggatggaaggcgac
ggtccgcgccgtctccagctttccgccaccggccccgcagaggtgcgcgcgggcgacatc
accaccgtgggcgacatcgaagtgatgaaccccgacctggtgatctgccacctggaccag
ggcgcgacgctgaacatggaactgaccgccgacgtcggcaagggctatgtccccgccgtc
gccaaccgtccggccgacgccccgatcggcctgatcccgatcgacgcgctctattcgccg
gtgcggcaggtcgcctacaaggtcgacaatacccgcgtcggccaggaactggactatgac
aagctgtcgctgaccgtcgagaccgacggcaccgtcacgccggaagacgcggtggcctat
gccgcccgcatcctgcaggaccagcttcagttgttcgtccacttcgaggacgcgctgccc
gccgccgctccggctgccggcgccgccgccggcggttcggccagcgagggcgagagcgac
gcgaaccagatcaaccgctacctgctcaagaaggtggacgaactggaactgtcggtccgc
agcgccaactgcctcaagaacgacaacatcatctatatcggcgacctggtccagaagacc
gaggccgagatgctgcgcacccccaatttcggccgcaagtcgctgaacgaaatcaaggaa
gtgctgtcgtccatggggctgcgcctgggcatggacatccccggctggccgccggagaat
atcgaggaaatggccaagaagctcgaacaggagctgctgggttaa
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