Sphingobium indicum UT26S: SJA_C1-08020
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Entry
SJA_C1-08020 CDS
T01201
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SJA_C1-08020 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-08020 (alkA)
Enzymes [BR:
sjp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SJA_C1-08020 (alkA)
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SJA_C1-08020 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
BAI95636
UniProt:
D4YZ54
LinkDB
All DBs
Position
1:complement(814718..815335)
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AA seq
205 aa
AA seq
DB search
MVNTAEELRASLDVIAAMEPGFAAAIGRVGYPLPRMREPGYETLLRTIVGQQVSVAAAAA
VWRRLETELGAGCAPDALLSRDFDALRACGLSRQKQGYARSLAELVVSGGIDLHDLPQDD
EEAIAQLVRIKGIGRWSAEIYLLFAEGRPDVWPAGDLAVQIEIGRILGLPERPGEKLTRE
LAERWRPHRGAAAIMAWHHYNTEVL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggtgaatacagcggaagagttgcgggccagcctggacgtcatcgccgccatggagccg
ggtttcgccgcggcgatcggccgggtcggctatcccctgccccgcatgcgcgaaccgggc
tatgaaaccctgctgcgcaccatcgtcggccagcaggtgagcgtcgccgcggccgccgcc
gtctggcgcaggctggagacggaactgggcgcgggctgcgcgccggacgccctgctctcc
cgcgatttcgacgcgctgcgcgcctgcggcctgtcgcggcagaagcagggctatgcccgc
agcctggcggaactggtggtgagcggcggcatcgacctgcacgacctgccccaggacgat
gaggaagccatcgcgcaactggtgcggatcaaggggatcgggcgctggtcggcggaaatc
tacctgctgttcgcggaagggcggccggatgtctggccggcgggagacctggcggtgcag
atcgagatcgggcggatattgggcctgcccgaacggcccggcgagaagctgacgcgcgag
ctggccgaacgctggcgcccccatcgcggcgcggcggcgatcatggcctggcaccattat
aatacggaggtcttgtaa
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