Sphingobium indicum UT26S: SJA_C1-08210
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Entry
SJA_C1-08210 CDS
T01201
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SJA_C1-08210 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-08210 (mutM)
Enzymes [BR:
sjp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SJA_C1-08210 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SJA_C1-08210 (mutM)
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SJA_C1-08210 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Gln-synt_N_2
Motif
Other DBs
NCBI-ProteinID:
BAI95655
UniProt:
D4YZ73
LinkDB
All DBs
Position
1:833961..834773
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTVAGLRSVLQGSLLTRVEPRRADLRFPIPADLRQRLTGATVTGLSRRAKYG
LIDTDRGDTLIFHLGMSGRWRIDPAEIGAHDHLLIGTGGGRLLALNDPRRFGSLDLVRSE
AREAYNPFTRMGPEPLGPDFTPDSLAAALKGKATSIKAALLDQRIVAGLGNIYVCEALNM
AGIAPTREAGRIGRARLVLLVDAIREVLAAAIAAGGSTLRDYARPDGELGYFSKQWRVYG
REGEPCVCGTPIRRRLDGGRSTFFCPKCQK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaacttcccgaagtcgaaaccaccgtggcgggcctgcgctccgtcctgcaaggc
tcgctcctgacgcgggtggagccgcggcgcgccgacctgcgcttcccgatacccgccgac
ctgcgccagcggctgaccggcgccaccgtcaccggcctgtcgcgccgcgccaaatatggc
ctgatcgacaccgatcgcggcgacacgctgatcttccaccttggcatgtcgggccgctgg
cgaatcgatccggcggagatcggggcgcatgatcatctgctgatcgggacggggggaggg
cggctgcttgcgctgaacgacccgcgccgcttcggctcgctcgacctggttcgcagcgag
gcgcgggaagcctacaaccccttcacccgcatgggaccggaaccgctggggccggatttc
acccccgatagcctggccgccgcgctcaagggcaaggcgacgtcgatcaaggccgcgctg
ctcgatcagcgcatcgtcgcgggactgggcaatatctatgtctgcgaggcgctcaacatg
gcgggcatcgccccgacgcgcgaagcgggccggatcggccgggcgcgtctcgtcctgctg
gtcgacgcgattcgggaggtgctggccgccgccatcgccgcaggcggctccaccctgcgc
gactatgcgcggcccgacggggaactgggctatttctccaagcaatggcgggtctatggc
cgcgaaggggagccctgcgtctgcggcacgcccatcaggcgccgcctggacgggggcaga
tcgacctttttctgcccgaaatgccagaaatag
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