Sphingobium indicum UT26S: SJA_C1-10220
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Entry
SJA_C1-10220 CDS
T01201
Name
(GenBank) putative ATPase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-10220
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SJA_C1-10220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_10
FtsK_SpoIIIE
ResIII
AAA_22
Hydrolase
TrwB_AAD_bind
SLFN-g3_helicase
CbiA
AAA_7
AAA_19
T2SSE
AAA_25
Motif
Other DBs
NCBI-ProteinID:
BAI95856
UniProt:
D4YZS4
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All DBs
Position
1:complement(1028226..1029851)
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AA seq
541 aa
AA seq
DB search
MSDGIFIGLGAPDKDGGIPQTLNLRRANRHGLIAGATGTGKTVTLQGIAESFSALGVPVF
LADVKGDLSGISMAGSPTAKNADKLVARAQEIGLDNYSYADNPAIFWDLYGQQGHPVRTT
VSEMGPLLLSRLMGLNETQEGVLSIAFKYADEQGLLLLDLGDLQAMLAYCAENADSLSAQ
YGNVTKASVGAIQRQLLQLESQGGDHFFGEPALDIHDMLKVDEKGRGYVNILAADRLMQS
PKLYATFLLWLLSELFETLPEVGDPDKPVLVFFFDEAHLLFDDAPKALTDKIEQVVRLIR
SKGVGVYFVTQNPIDIPEDVAGQLGNRVQHALRAFTPRDQKAIKAAAETFRINPDLNVET
AITELKVGEALVSLLQEDGSPGIVQRTLIAPPRSRLGPLDAKERAIIQSISPCAGKYDAT
VDRESAEEILAARGQAAAAAAQAAKAQAEADKAAAAQAKVEAKQREAQLKEQARQEAAAA
REAAKPSGFDKAIQSATRSAASSVGRQVANELGRAVFGGSSRRSGGIAGQLVRGILGSLF
K
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacggcattttcatcggccttggcgcgccggacaaggatggcggcatcccgcag
acgctgaacctgcgccgggccaatcgccatgggctgatcgcgggcgcgaccggcaccggc
aagaccgtgacgctgcagggcatcgccgagagcttctcggcgctgggcgtccccgtcttc
ctcgccgacgtgaagggcgacctgtcgggcatttccatggccggttcccccaccgcgaaa
aatgccgacaagctggtcgcccgcgcgcaggagatcggcctcgacaattacagctatgcc
gacaatcccgccatcttctgggacttgtacgggcagcagggccatcccgtccgcaccacc
gtcagcgagatggggccgctgctcctctcccgcctgatgggtctcaacgaaacgcaggag
ggggtgctttccatcgccttcaaatatgccgacgagcagggcctgctgctgctggacctg
ggcgatctgcaggcgatgctggcctattgcgcggaaaatgccgacagcctgtccgcccaa
tatggcaatgtgaccaaggccagcgtcggcgcgatccagcggcaactgctccagttggaa
agccagggcggcgaccatttcttcggcgaacccgcgctcgacatccacgacatgctgaag
gtggatgagaaggggcgcggctatgtcaacatcctcgccgccgacaggctgatgcagagc
ccgaagctctacgccaccttcctgctctggctgctgtccgaactgtttgagacgctgccc
gaagtgggcgatccggacaagccggtgctcgtcttcttcttcgacgaagcgcatctgctt
ttcgacgacgcgcccaaggcgctgaccgacaagatcgagcaggtggtgcgcctgatccga
tccaagggcgtgggcgtctatttcgtgacgcagaaccccatcgacattccggaggatgtg
gcgggccagctaggcaaccgggtccagcacgcgctgcgcgccttcaccccccgcgaccag
aaggcgatcaaggcggcggcggaaacattccggatcaacccggatctgaacgtcgagacc
gccatcaccgaactgaaggtgggcgaggccctggtatcgttgttgcaggaggacggctcg
cccggcatcgtgcagcggacgctgatcgccccgccccgctcgcgccttggcccgctggac
gcgaaggaacgggcgatcatccagtcgatttcgccctgcgcgggcaaatatgacgcgacc
gtcgaccgcgagtccgccgaggagatattggcggcgcggggtcaggccgccgcagccgcc
gcgcaggccgccaaggcgcaggccgaagccgacaaggccgccgccgcccaggccaaggtg
gaggcgaagcagcgtgaggcccagctcaaggaacaggcccggcaggaagccgccgccgcc
cgtgaagccgccaagccgtccggtttcgacaaggcgatccagtccgccacccgatccgcc
gcgtcgtcggtcgggcgtcaggtcgccaatgaactgggccgcgccgtgttcggcgggtcc
agccgcaggtcgggcggaatcgcgggccaactggtgcgcggcatattgggcagcctgttc
aaataa
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