Sphingobium indicum UT26S: SJA_C1-10730
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Entry
SJA_C1-10730 CDS
T01201
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase/fumarate reductase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00020
Citrate cycle (TCA cycle)
sjp00190
Oxidative phosphorylation
sjp00650
Butanoate metabolism
sjp00720
Other carbon fixation pathways
sjp01100
Metabolic pathways
sjp01110
Biosynthesis of secondary metabolites
sjp01120
Microbial metabolism in diverse environments
sjp01200
Carbon metabolism
Module
sjp_M00009
Citrate cycle (TCA cycle, Krebs cycle)
sjp_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
sjp_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SJA_C1-10730 (sdhA)
00650 Butanoate metabolism
SJA_C1-10730 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
SJA_C1-10730 (sdhA)
00720 Other carbon fixation pathways
SJA_C1-10730 (sdhA)
Enzymes [BR:
sjp01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SJA_C1-10730 (sdhA)
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
Thi4
DAO
FAD_oxidored
Motif
Other DBs
NCBI-ProteinID:
BAI95907
UniProt:
D4YZX5
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All DBs
Position
1:1078073..1079887
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AA seq
604 aa
AA seq
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MSEAYKIIDHTYDTVVVGAGGSGLRATMGSAEAGLKTACITKLFPTRSHTVAAQGGIAAS
LGNNSPDHWTWHMYDTVKGSDWLGDQDAIEYMVREAPAAVIELEHAGVPFSRNDNGTIYQ
RPFGGHMQNMGAGPPVQRTCAAADRTGHAMLHALYQQSLKYDADFYIEYFAIDLIMEDGP
NGKECRGVIAICMEDGSIHRFRSHAVVLATGGYGRAYFSATSAHSCTGDGGGMVLRAGLP
LQDLEFVQFHPTGIYGAGVLITEGARGEGGYLTNSEGERFMERYAPSAKDLASRDVVSRS
MAMEMREGRGVGPNKDHIYLHLDHIDPKVLAERLPGITESGKIFAGVDLTRQPLPVTPTV
HYNMGGIPCNYHGQVVTKVGDDPEVVVPGLYAVGEAACVSVHGANRLGSNSLIDLVVFGR
ATGLHLKETLKPNASHRPLPKDAADLALGRLDHYRNAKGGSPTAKIRLEMQHTMQKHAAV
FRDSALLAEGVTKMAQVNQSLADVGVSDRSLIWNTDLIETLELDNLMSQAVCTMVSAENR
KESRGAHAHEDFPNRDDNEWMKHTVSWFDGWGGKGGKVTLDYRPVHDYTLTDEAEYIKPK
ARVY
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagcctacaagatcatcgaccacacctatgacacggtcgtcgtgggcgccggc
ggctccggcctgcgcgccaccatgggcagcgcggaggcgggcctgaagaccgcctgcatc
accaagctgttcccgacccgcagccacaccgtggcggcgcagggcggcatcgcggcttcg
ctgggcaacaattcgcccgaccactggacctggcacatgtacgacaccgtcaaggggtcg
gactggctgggcgaccaggacgcgatcgaatatatggtgcgcgaggcgccggccgccgtg
atcgagctggaacatgcgggcgtgccgttcagccgcaacgacaacggcaccatctaccag
cgtccgttcggcggccacatgcagaatatgggcgccggcccgccggtgcagcgcacctgc
gccgccgccgaccgcaccggccacgccatgctgcatgccctgtaccagcagagcctgaaa
tatgatgcggacttctacatcgaatatttcgccatcgacctcatcatggaagacggcccg
aacggcaaggaatgccgcggcgtcatcgccatctgcatggaggatggctcgatccaccgc
ttccgcagccatgccgtggtgctggcgacgggcggctatggccgcgcctatttctccgcc
acctcggcacatagctgcaccggcgacggcggcggcatggtgctgcgcgccgggctgccg
ctccaggacctggagttcgtgcagttccacccgaccggcatctacggcgcgggcgtgctc
atcaccgagggcgcgcgcggcgagggcggttatctgaccaattccgagggcgagcgcttc
atggagcgttatgccccctcggccaaggacctggcgtcgcgcgacgtcgtgtcccgctcc
atggcgatggaaatgcgcgaagggcgcggcgtgggtccgaacaaggaccatatctacctg
cacctcgaccatatcgatcccaaggtgctggcggagcgcctgccgggcatcaccgagagc
ggcaagatcttcgcgggcgtcgacctgacccgccagccgctgccggtgacgccgaccgtc
cactataatatgggcggcatcccctgcaattatcatgggcaggtggtgaccaaggtcggc
gacgatccggaagtggtggtgccgggcctctatgcggtcggcgaagcggcctgcgtgtcg
gtccatggcgcgaaccgcctgggttccaactcgctgatcgaccttgtcgtgttcggccgc
gccaccggcctgcaccttaaggaaacgctgaagccgaacgccagccatcgtccgctgccc
aaggatgcggccgacctggcgctgggtcgcctggatcactatcgcaacgccaagggcgga
tcgccgacggcgaagatccggctggaaatgcagcacaccatgcagaagcatgccgccgtg
ttccgcgacagcgcgttgctggccgagggcgtcaccaagatggcgcaggtcaaccagagc
ctggccgatgtcggcgtgtcggatcgctcgctgatctggaacaccgacctcatcgagacg
ctggaactggacaatctgatgtcccaggcggtctgcaccatggtcagcgcggaaaaccgc
aaggaaagccgcggcgcccacgcgcatgaggacttcccgaaccgcgacgacaatgagtgg
atgaagcacaccgtaagctggttcgacggctggggcggaaagggcggcaaggtgacgctc
gattaccgtccggtgcacgactatacgctcacggacgaggcggaatatatcaagcccaag
gcgcgcgtttactaa
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