Sphingobium indicum UT26S: SJA_C1-12400
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Entry
SJA_C1-12400 CDS
T01201
Name
(GenBank) OOP-family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjp02000
]
SJA_C1-12400
Transporters [BR:
sjp02000
]
Other transporters
Pores ion channels [TC:
1
]
SJA_C1-12400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
Surface_Ag_2
OmpA_membrane
Opacity
Motif
Other DBs
NCBI-ProteinID:
BAI96074
UniProt:
D4Z0E2
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All DBs
Position
1:1226970..1228052
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AA seq
360 aa
AA seq
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MRKLALAAVLATSALATPALARDNSWYVGIDSGVVLVEDQDITFTPGNAGAASNTVGVDY
HKGFDGDAVIGYDFGGFRLEAEAGYKRAEVDLDKSGFGGAASALSFMLNGLLDFGPDDGL
QGFVGGGVGVSRGKLANDLVNDSDTGFAWQAIAGVRYPLTTNVDVSLKYRFFNQDDIKLV
PAYTTIGGPAGSSVDTKLRTHSLLLGLTYNFGGEPAAPPPPPPPPPPPPPPPPPPPPPPP
PVAECSPGPYIVFFEWDKSDITPDAATILDNAVSAYSNCGSAQVMLAGYADRSGSASYNV
GLSQRRADAVKAYISSKGIPDGVITTQAFGESNPRVETADGVRELQNRRVEITYGPGSGQ
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcttgccctcgcggctgtgcttgcgaccagcgccctggccaccccggccttg
gcgcgtgacaatagctggtatgtcggcatcgactccggcgttgttctcgtcgaagatcag
gacatcactttcacccccggcaacgctggcgccgccagcaacacggtcggcgtggactac
cacaagggcttcgacggcgatgccgtgatcggttacgacttcggcggtttccgcctggaa
gcggaagccggttacaagcgcgctgaagtcgacctggacaagagcggtttcggcggcgcg
gcttcggccctgtcgttcatgctgaacggcttgctggacttcggtcccgatgacggcctg
cagggcttcgtcggcggcggcgtcggcgtgtcgcgcggcaagctggccaacgacctggtc
aacgattccgacaccggcttcgcctggcaggcgatcgctggcgtccgctatccgctgacc
accaacgtggacgtctcgctgaagtatcgcttcttcaaccaggacgacatcaagctggtt
ccggcctacacgaccatcggcggccccgccggttcgtcggtcgacaccaagctgcgcacc
cacagcctgctgctgggcctgacctacaacttcggtggcgaaccggctgctccgccgccg
cccccgccgcctccgccgcctccgccgcccccgccgcctccgcccccgccgcctccgccg
ccggtggccgagtgcagccctgggccgtacatcgtcttcttcgaatgggacaagtcggac
atcacgcctgacgccgccaccattctggacaatgcggtttcggcctacagcaactgcggc
agcgcccaggtcatgctggcgggctatgcggaccgttcgggttcggcctcctacaacgtc
ggcctgtcccagcgtcgcgccgatgccgtcaaggcctatatctcgtcgaagggcatcccc
gacggcgtgatcacgacccaggcgttcggtgaatcgaacccccgcgtcgaaaccgccgac
ggcgttcgcgaactgcagaaccgtcgcgtggaaatcacctacggtccgggttcgggtcag
taa
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