Sphingobium indicum UT26S: SJA_C1-12520
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Entry
SJA_C1-12520 CDS
T01201
Symbol
fadD
Name
(GenBank) long-chain fatty-acid-CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00061
Fatty acid biosynthesis
sjp00071
Fatty acid degradation
sjp01100
Metabolic pathways
sjp01212
Fatty acid metabolism
sjp02024
Quorum sensing
sjp04146
Peroxisome
Module
sjp_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
SJA_C1-12520 (fadD)
00071 Fatty acid degradation
SJA_C1-12520 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
SJA_C1-12520 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
SJA_C1-12520 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sjp01004
]
SJA_C1-12520 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sjp04147
]
SJA_C1-12520 (fadD)
Enzymes [BR:
sjp01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
SJA_C1-12520 (fadD)
Lipid biosynthesis proteins [BR:
sjp01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
SJA_C1-12520 (fadD)
Exosome [BR:
sjp04147
]
Exosomal proteins
Exosomal proteins of breast milk
SJA_C1-12520 (fadD)
Exosomal proteins of breast cancer cells
SJA_C1-12520 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
BAI96086
UniProt:
D4Z0F4
LinkDB
All DBs
Position
1:1238264..1239970
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AA seq
568 aa
AA seq
DB search
MESNENIWKTRYNHPFPWEQTFPPLSMVDMVANSATAHPQAVMIDFMGRKTTYGEMWRTI
RRVARGLQDMGVRKGDRVGLYLPNVPHYVAAYYGAMMAGAIVVNYSPLYTAAELEHQVED
SGTKILFTLSASALLPTALEVLNNSSLERLVVGSVAEVLPPAKSVLFRLFKRKETSTVPH
DPRIVHYADLLRHGEDPAPVAIEPEQDIALLQYTGGTTGMPKGAMLTHQNLTANARQVRL
IDPHLEAPDRILAVLPFFHVFANTCVLNRTVLNGGEMVMLPRFDGTQVLAAIQRTRATSL
PGVPTMYQALLDHPATPNIDFSSLRLCISGGAPLPLEVKQRFEAMTGATLVEGYGLTESS
PVLCCNPFEGLNKPGTVGQPVSGTRVKLVDREDPTRPSPEGEPGELVFDGPQIMKGYWQR
PDADKEVFVDGWLRTGDVGVIDADGYVKIVDRLKDMIAVGGFKVFPSEVEKVLYHHPAVK
EALVIGIPDHYRGECPKAFVTLQDGSDIDGAALKDWLNPQLGKHEKVCEVEVRLNLPTTL
VGKLSRKELVAEERAKAEAAARQTGTAG
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atggagagcaacgaaaacatctggaaaacccgctataatcatccctttccgtgggaacag
acattcccgccgctatcgatggtggacatggtggcgaacagcgccacggcccacccgcag
gcggtgatgatcgacttcatgggccgcaagacgacctatggcgaaatgtggcgcaccatc
cggcgggttgctaggggcttgcaggatatgggcgtccggaagggcgatcgggtcggcctc
taccttcccaacgtgccccattatgtcgcggcctattatggcgcgatgatggccggggcc
attgtggtcaactattcccctctctacaccgccgccgagctggagcatcaggtcgaggat
agcggcacgaagatcctcttcaccctgtcggccagcgcgctgctgcccacggcgctggag
gtgctgaacaacagcagcctggagcggctggtcgtcggcagcgttgcggaagtgctgccg
cccgccaagtcggtgctgttccgcctgttcaagcggaaggagacctccacggtcccgcac
gatccgcgcatcgtccattatgccgatctgctgcgccatggcgaggatcccgcgcccgtg
gccatcgaaccggagcaggacatcgccctgctgcaatataccggcggcaccaccggcatg
cccaagggcgcgatgctgacccaccagaacctgacagccaatgcgcggcaggtgcgcctg
atcgatcctcatctcgaagcgcccgaccgcatattggcggtgctgcccttcttccatgtc
ttcgccaatacctgcgtcctcaatcgcacggtgctgaacggcggggagatggtgatgctg
ccgcgtttcgacggcacgcaggtgctggcggcgatccagcggaccagggcgacctcgctg
cccggcgtgccgaccatgtaccaggcgctgctggatcatccggcgacgccgaatatcgac
ttttcctcgctgcgcctgtgcatttccggcggcgcgcccctgccgctggaggtcaagcag
cggttcgaggcgatgaccggggccacgctggtggagggatatggcctcaccgaaagcagc
ccggtcctctgttgcaacccctttgagggcctcaacaagcccggcaccgtcggacagccg
gtttccggcacgcgggtcaagctggtcgaccgagaagacccgacccgcccgtcccccgaa
ggcgaaccgggcgagctggtctttgacgggccgcagatcatgaagggctattggcagcgc
ccggacgccgacaaggaggtgttcgtcgacggctggctgcggaccggcgatgtcggggtg
atcgacgcggacggctatgtgaagatcgtcgaccggctgaaggacatgatcgctgtagga
ggcttcaaggtcttccccagcgaggtcgagaaagtcctctaccaccatccggcggtcaag
gaagcgctggtgatcggcattcccgaccattatcgcggcgaatgtcccaaggccttcgtg
accttgcaggacgggtcggacatcgatggcgcggcgctcaaggactggttgaacccgcaa
ctgggcaagcatgagaaggtgtgcgaggtggaggtgcgcctgaacctgcccacgacgctg
gtcggcaagctgtcgcgcaaggaactggtggccgaggagcgcgccaaggcggaggcggcg
gcgcggcagactggaaccgcgggctga
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