Sphingobium indicum UT26S: SJA_C1-16240
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Entry
SJA_C1-16240 CDS
T01201
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sjp03016
]
SJA_C1-16240 (truB)
Enzymes [BR:
sjp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SJA_C1-16240 (truB)
Transfer RNA biogenesis [BR:
sjp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SJA_C1-16240 (truB)
Prokaryotic type
SJA_C1-16240 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
BAI96458
UniProt:
D4Z1H6
LinkDB
All DBs
Position
1:1613551..1614471
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AA seq
306 aa
AA seq
DB search
MHGWIILDKPHGLGSTQAVSAVKRALRVSGAGKWKVGHGGTLDPLATGVLPIAVGEATKL
AGRMLDSDKIYDFTVRFGVQTDTLDLEGREIAASDHRPTLAEVEAILPRFTGPIEQAPPA
YSAILIDGRRAYDLARKGEDVEMKTRAVTVHALVIKGQEAEGPEIGTRGLASVTLRAHVS
KGTYIRSLARDIALALGTVGHVTMLRRVKAGPFTLESAISLDKLDEAARGGGIAQLMLPL
TAGLDDIPALAVSPDEALALRQGKVLVGKPHTGLMLAMEGATPVALVESSGPETLREIRV
VRGFNL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgcacggctggatcatcctcgataaaccccatggccttggctcgacgcaggccgtcagc
gcggtaaagcgcgccctgcgcgtcagcggcgcgggcaagtggaaggtcggccatggcggc
acgctcgatccgctggcgaccggcgtgctgcccatcgcggtcggggaggcgaccaagctc
gccgggcgaatgctcgacagcgacaaaatctatgatttcaccgtccgtttcggcgtccag
accgacacgctggacctggagggccgggaaatcgccgccagcgaccatcgcccgacgctg
gcggaggtggaggcgatattgccccgcttcaccggccccatcgaacaggcgccccccgcc
tacagcgccatcctgatcgacggccggcgcgcctacgacctcgcccgcaagggggaggat
gtggagatgaagacccgcgccgtcaccgtccacgctctcgtcatcaagggacaagaggcg
gaagggccagagatcgggacaagggggctcgcctccgtcaccctccgcgcccatgtctcc
aagggcacctatatccgctccctcgcccgcgacatcgcgctggcgctcggcacggtcggc
catgtcaccatgctccgccgcgtcaaggcaggccccttcaccctggaatccgcgatttcg
ctggacaaattggacgaagctgctaggggcggcggcatcgcgcagcttatgctgccgttg
accgcagggctggacgacatcccggctctcgcagtctctcccgatgaagcgctggctctc
cgacaggggaaggtgcttgtggggaaaccgcataccggtctcatgctggcgatggagggc
gcaacgcccgtcgcgctggtggagtccagtggcccagaaacccttagggaaatcagggtg
gtgcgcggcttcaatctctag
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