Sphingobium indicum UT26S: SJA_C1-16490
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Entry
SJA_C1-16490 CDS
T01201
Name
(GenBank) putative helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-16490
Enzymes [BR:
sjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SJA_C1-16490
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SJA_C1-16490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
SIP
Motif
Other DBs
NCBI-ProteinID:
BAI96483
UniProt:
D4Z1K1
LinkDB
All DBs
Position
1:1642929..1645907
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AA seq
992 aa
AA seq
DB search
MGDRTRPALFNIPAHRAFSDALVTGVLTQHGDDPMRLAQGMILLPNNRAIRSVSDAFVRK
SGGGLLLPRLVALGDPDLGEQVGGALDPLGEDDDPIPPAIAPMRRQMILARMVQQASAHP
VDAGQALKLAQALGAVLDQIQVERLSVAALADLTLSDELSRHWQTSLKLFGILLAQWPQE
LSRLGCIDLADRRNRLLERVAARWAKAPPEGFVIVAGMSTTAPAIAGLLRRIALMPKGAV
VFAGLDQEMDRDAWDAIGPFDADPLTGRAPAGHETHPQYALKRLLDRMSATRDDVALWRW
GSEHDARAVRGRNISNAMLPPRLTSRWRDLKTADRSLAGVEALEVATPGEEAQAIAIALR
EAVETPGRTAALVTPDRQLATRVSAHLRRWGIEADDSAGLPLSRLPPGTLLIAMAEALAE
RFAPVALLTLLKHPLVMRGEERLGWLEGVRGLDLLLRGPRPQAGIVGLDLLLAERDGEDR
QCVLRGRTRLWWAEARALLEPLEQAFLAAPDLAAQLAAIREHAGRLSHDAVWAGHQGHAA
ADLFAEMEEAASEGPRQADIRALPALFDHLLGGVSVRPPQGGHPRIAILGLIEARLVQTD
LIILGGLNEGTWPGLPAPDPWLAPRIRREIGLPGLESRIGLAAHDFASALGAPQILITRA
RRGSGGPAVASRFWLRLKAMAGPQWKSAGRYAALAQAIDHAAEHRPAGRPAPVPPLSVRP
KVIPVTDVDRLKADPYAFYARRILRLARLDPVDADAGPAWRGTAVHEILQQWAEAGSGDL
ADLEARARAMFDRPDVHPLLKALWQPRLIEAIRWIAAEVASDLAAGRKILAVEIEGRAEI
AGVTLTGKADRIDLLPDGKLGIVDYKTGKPPSARQVKAGYALQLGLLGLIAEHDGFPGTH
PAPVAGGFEYWSLAKKGDSFGYRESPVDPLGKRDKIVTADFTSQVYSQFEDVAAAWLTGQ
APFDAQVNPEVANYGDYDQLMRLEEWYGRDDG
NT seq
2979 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatcgcacccgcccggctttgttcaacatccccgcgcatcgcgccttttccgat
gcgctggtgacgggcgtcctgacccagcatggcgacgatccgatgcggctggcgcagggc
atgatcctgctgcccaacaatcgcgccatccggtcggtcagcgacgctttcgtgcggaaa
tcgggcggcgggctgctgctgccgcgccttgtcgcgctgggcgatcccgatctgggcgaa
caggtgggcggcgcgctcgatcccctgggggaggacgacgaccccatcccccccgccata
gcgccgatgcgccgccagatgatcctggcgcggatggtgcagcaggcgtccgcgcatccg
gtggacgcggggcaggcgttgaagctcgcccaggcgcttggcgcggtgctggaccagatc
caggtcgagcggctttccgtcgctgcgctggccgatctcaccctgtcggacgaattgtcg
cggcattggcagacgtcgctcaagctgttcggcatattgctggcgcaatggccgcaggaa
ctgtcgcggctcggctgcatcgacctggcggatcggcgcaaccggctgctggaacgggtg
gcggcgcgctgggcgaaggcgccgccggagggctttgtgatcgtggcgggcatgtcgacc
accgccccggcgattgccggattgttgcgtaggatcgcgctgatgcccaaaggggcggtc
gtctttgccggtctggatcaggagatggacagggatgcgtgggacgccatcggtcccttc
gacgccgatccgctgactggccgggcgcccgccgggcatgaaacccatccgcaatatgcg
ttgaaacgcctgctcgaccggatgagcgccacccgcgacgatgtggcgctctggcgttgg
ggcagcgagcatgacgcccgcgccgttcgggggcgcaacatctccaacgccatgctgccg
cctcggctgaccagccgctggcgcgacctgaagacggcggaccgctcgctggccggggtg
gaggcgctggaggtcgcgacgcccggagaggaggcgcaggccatcgccatcgccctgcgc
gaagcggtcgagacgccgggccgcaccgccgcgctggtgacgccggaccggcagttggcg
acccgggtgtccgcgcatctgcggcgctggggcatagaggccgacgattccgcaggcctg
ccgctgtcgcgcctgccgcccggaaccttgctgatcgccatggcggaggctttggcggaa
cggttcgcgccggttgcgctgctgaccctgctcaagcatccgctggtcatgcggggggag
gagcggcttggttggctggagggggtgcgcgggctggacctgctgctgcgcgggccacgg
ccgcaggcggggatcgtcggcctggatctgttgctggcggagcgggacggcgaagaccgg
cagtgcgtcctgcgcggccgcacgcggctctggtgggcggaggcgcgcgccctgctggaa
ccgttggagcaggcctttctggccgcgcccgaccttgcggcgcaattggcggccattcgc
gaacatgccggtcgcctgtcgcatgatgcggtctgggccgggcatcagggtcatgccgcc
gccgacctcttcgccgagatggaggaggcggccagcgaagggccgcgtcaggccgacatt
cgcgccctgcctgccctgttcgaccatcttctgggcggcgtgtcggtccgtccgccgcag
ggcgggcatccgcgcatcgccattctgggcctgatcgaggcgcggctggtgcagacggac
ctcatcattctgggcgggctcaatgagggcacatggccggggctgcccgcgcccgatccc
tggctggcgccgcgcatccggcgggaaatcggcctgccggggctggaaagccgcatcggc
cttgccgcccatgatttcgccagtgcgttgggcgcaccgcaaatcctgatcacgcgggcg
cggcggggatcgggcggtccggcggtcgcatcgcgcttctggctgcggttgaaggcgatg
gccgggccgcaatggaagagcgccggccgctatgccgcgctggcgcaggcgatcgaccat
gcggcggagcatcggcccgccggacgccccgcgccggtgccgccgctttccgtgcggccg
aaggtcattcccgtaaccgatgtcgaccggctgaaggcggacccctatgccttctacgcc
aggcgcattctgcgtctggcgcggctcgatccggtggatgccgatgcgggaccggcgtgg
cgcggcacggcggtgcatgaaatcctgcaacaatgggcggaggcgggcagcggcgacctc
gccgatctggaggcgcgggcgcgggcgatgttcgaccggcccgacgtgcatccgctgctg
aaggcgctctggcagccgcgcctgatcgaggccatccgctggatcgccgccgaagtggcg
agcgaccttgcggcggggcgcaagatcctcgccgtggagatcgaaggccgggcggagatc
gccggggtgacgctgaccggcaaggcggaccgcatcgacctgctgccggacgggaagctg
gggatcgtcgactacaagaccggcaagccgcccagcgcgcgccaggtcaaggcgggctat
gcgctgcagctcggcctgctggggctgatcgcggagcatgacggctttcccggcacccat
ccggccccggtcgcgggcggcttcgaatattggtcgctcgccaagaagggcgattccttc
ggctatcgcgaaagcccggtcgatcccctgggcaagcgggacaagatcgtcaccgccgac
ttcacgtcccaggtctattcgcagttcgaggatgtcgccgccgcctggcttaccggacag
gcgcccttcgacgcgcaggtgaacccggaagtcgccaattacggcgattatgaccagctc
atgcggctggaggaatggtatggccgggacgatggctaa
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