Sphingobium indicum UT26S: SJA_C1-16500
Help
Entry
SJA_C1-16500 CDS
T01201
Name
(GenBank) putative UvrD/Rep helicase
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sjp03400
]
SJA_C1-16500
Enzymes [BR:
sjp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SJA_C1-16500
DNA repair and recombination proteins [BR:
sjp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
SJA_C1-16500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DUF5721
Motif
Other DBs
NCBI-ProteinID:
BAI96484
UniProt:
D4Z1K2
LinkDB
All DBs
Position
1:1645888..1649331
Genome browser
AA seq
1147 aa
AA seq
DB search
MAGTMAKKAKALQPLAGAQAQAAAPDAHVWLSASAGTGKTHVLTARVFRLLLQGVRPENI
LCLTFTKAGAAEMADRVHDRLAAWVLMDEADLFHDLEALGEESGPEARNRARRLFAEVLE
STGGGLRIQTIHGFCQQLLTAFPLEADLPPGFRPLDQREQATLARQTLADMAVVAQEQHD
KALMDALQALSLRMGEGGAENFLLRCAARLDALEALPEDIAPWLLRELGLPEGDIDAHIA
EQCGDESFDMRTLVWIAQANADWGTGRALERCDRIARWRALDPAGRAAALSDLHAVWAKA
GGELISTGKGWAPSVDGYGDAIARMHECCSELLGLRVRAAYAALLARALHAGRAYARAYA
EAKRLAGAVDFDDLIANTAQLLSQPGIADWIRYKLDQRIDHILVDEAQDTNVSQWQIVGA
LAAEFFAGEGAKGDRVRTLFTVGDFKQAIFGFQGTSPEAFRAAQIVFQRHAEDASQMFHD
LSLQHSFRSTPAVLDVVDRTIATLSAERFGLEAGEVRHVSANRFPGEVLLWKPVIAGLSD
EAEGEEDWAADQERVLAQTIARQIRQWIDDGLMLESRGRSVTAGDIMILVRRRSELARLI
VARLYEEKVAVAGIDRLRLNAPLAVRDLLAALRFAVQPEDDLNLAALLVSPLIGWTQDEL
MDRLIGRRVGLWQHLTQTLDGALLEPLRGLLGQADFTTPYRYLEAILSGPMDGRRRLVER
LGAEAADPIEELLNAALDFENDDYPSLQRFIDWFDRGEVEIVRDAAAQGDMLRLLTVHGA
KGLQAPIVILADACLDPDAGNRAGSLEWNGLPIIAPRKGERHGEIGRVAEEASAVERAEH
WRLLYVALTRAEERLVVTGSLGPRAKGEVKPESWYAAVEGALISLDAEWEADPLWGARRR
WRGHETLPPKAAEADVAENGADHDEPDWLRKPAPAEARPPRPLAPSAAVEDDVPYPPPTP
AMRDAAERGRWLHRLFERLAEVPPDDRRARADKWLAQQGLGDEARRHDVIEQALRVIGDP
QYAALFGPDALAEAPIAAVVGEAVIAGTVDRLRIGEDLVQLVDFKTGRISPLAVEEVPLA
HVRQMAAYAAALQVIFPGRRIEAGLLYTSAPRLIALPTELLARHKPGFPPAQENLPLPPV
ETDASPS
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggccgggacgatggctaaaaaggcgaaggccctgcaaccgctggcgggcgctcaggcg
caggcggccgcgcccgacgcccatgtgtggctgtcggcctcagcgggcacgggcaagacc
catgtgctgaccgcccgcgtcttccgcctgctgcttcagggcgtgcggccggaaaatatc
ctctgcctcaccttcaccaaggcgggtgcggcggaaatggcggatcgcgtccatgaccgg
ctcgccgcctgggtgctgatggacgaggcggaccttttccacgatctggaggcgctgggc
gaggagtccggcccggaagcccggaaccgcgcccgccgccttttcgccgaggtgctggaa
tcgaccggcggcgggctgcgcatccagacaatccatggcttttgccagcaattgctgacg
gcctttccgttggaggccgatctgccgcccggcttccgcccgctcgaccagcgcgagcag
gcgacgctggcgcgccagacgctggccgacatggcggtggtcgcgcaggagcagcacgat
aaggccctgatggatgccttgcaggcgctgagcctgcgcatgggggagggcggggccgag
aatttcctgctgcgctgcgccgcccggctggatgcgctggaggccttgccggaggatatc
gccccctggttgctgcgggaactggggctgcccgaaggcgacatcgacgcgcatatcgcg
gagcagtgcggggacgagtcgttcgacatgcgcacgctcgtctggatcgcgcaggccaat
gcggattggggcacgggacgggcgctggaacgctgcgaccggatagcgcgctggcgggct
ctcgatccggcggggagggcggctgcgctgtccgatctccatgcggtatgggcgaaggcg
ggcggcgaactgatttcgaccggcaagggctgggcgccttcggtggacggatatggcgac
gccatcgcacggatgcacgaatgctgttccgaactgctgggccttcgggttcgggccgcc
tatgccgccctgctcgccagggcattgcatgcggggcgcgcctatgcccgcgcctatgcg
gaggcgaagcggcttgcaggcgcggtggatttcgacgacctgatcgccaacaccgcccag
cttctgtcccagcccggcatcgccgactggattcgctacaagctcgaccagcggatcgac
catattttggtggacgaggcgcaggacaccaatgtcagccaatggcagatcgtcggcgcg
cttgcggcggaattctttgctggcgagggggcaaagggcgacagggtccgcaccctgttc
acggtcggcgacttcaagcaggcgatcttcggatttcagggcaccagccccgaagccttc
cgcgctgcgcagatcgtcttccagcgtcatgcggaggatgcgagccagatgttccacgac
ctctcgctccagcacagcttccgctctacgccggcggtgctggacgtggtcgaccgcacc
atcgcgacgctgagcgccgagcgtttcgggctggaggcgggcgaagtgcggcatgtcagc
gcgaaccgctttccgggcgaagtgctgctgtggaagccggtgatcgcgggcctttccgac
gaggccgaaggggaggaggattgggccgccgatcaggagcgggtgctggcgcagaccatc
gcgcggcagatcaggcagtggatcgatgacgggctgatgctggaaagccggggccgctcg
gtgacggcgggcgacatcatgatcctggtccgccgccgcagcgaactggcgcggctgatc
gtggcgcggctttatgaggagaaggtggcggtggcggggatcgaccggctgcgcctgaac
gcgcctttggcggtgcgcgacctgttggcggcgctgcgcttcgccgtgcagccggaggat
gatctgaacctggccgctttgctggtgtcgccgctgatcgggtggacgcaggacgagttg
atggatcgcctgatcggccgccgcgtcgggctgtggcagcatctgacgcagacgctggac
ggcgcgctgctggagccgttgcgggggttgctggggcaggcggatttcaccaccccttat
cgctatctggaagccatattgtccgggccgatggatggccgccgccgcctggtcgagcgg
ctgggagccgaggccgccgatcccatcgaggaattgctcaacgccgcgctcgacttcgag
aatgacgattatccctcgctccagcgcttcatcgactggttcgaccggggggaggtggag
atcgtgcgcgatgcagccgcgcagggggatatgctccgcctgctgacggtgcatggcgcg
aaggggctgcaggcgcccatcgtcatccttgccgacgcctgtctcgatccggacgcgggc
aaccgcgccggctcgctggagtggaacggcctgccgatcatcgcgccgcgcaagggggaa
cggcatggggagatcggacgggtggcggaggaagcgagcgccgtcgaacgggccgaacat
tggcgcctgctctatgtcgcgctgacgcgggcggaggaaaggctggtcgtgaccggatcg
ctcggtccccgcgccaagggggaggtgaagccggaaagctggtatgccgctgtcgagggt
gcgctgatctccctcgatgcggagtgggaggccgatccgctctggggcgcgcggcgcagg
tggcgggggcatgagacgcttccccccaaggccgcggaggcggacgttgccgaaaacggc
gctgatcacgacgagccagactggcttcgcaagcccgctcccgcagaagcgcggccgccg
cgcccgctggctccctccgccgccgtggaggacgatgtgccctatccgccgcccacccct
gcgatgcgcgatgcggccgagcgggggcgttggctgcaccggctgttcgagcggctggcc
gaggtgccgcccgacgaccgccgcgcccgcgccgacaaatggctggcgcagcaggggctg
ggcgatgaggcgcggcggcatgacgtcatcgaacaggcgttgcgcgtgatcggagacccg
caatatgccgcgctgttcgggccggacgcgctggccgaggcgcccatcgccgcagtcgtg
ggggaggcggtgatcgccggaaccgtcgaccggctgcgcatcggcgaggatctggtgcaa
ctggtcgatttcaagaccggccggatatcgccgctcgcggtggaggaggtgccgctggcc
catgtccggcagatggccgcctatgccgccgcgcttcaggtgatcttccccggccgccgg
atcgaggccgggttgctctacacgtcggcgccgcggctgatcgccctgccaacggaattg
ctggcccggcacaagcccggctttccgcccgcgcaggagaatttgccgctcccgcccgtt
gagacggatgcgtcaccatcctaa
DBGET
integrated database retrieval system
