Sphingobium indicum UT26S: SJA_C1-17960
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Entry
SJA_C1-17960 CDS
T01201
Symbol
mrdA
Name
(GenBank) penicillin binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00550
Peptidoglycan biosynthesis
sjp01100
Metabolic pathways
sjp01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SJA_C1-17960 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SJA_C1-17960 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sjp01011
]
SJA_C1-17960 (mrdA)
Enzymes [BR:
sjp01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
SJA_C1-17960 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
sjp01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
SJA_C1-17960 (mrdA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
EABR
Motif
Other DBs
NCBI-ProteinID:
BAI96630
UniProt:
D4Z1Z8
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All DBs
Position
1:1814786..1816855
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AA seq
689 aa
AA seq
DB search
MKLPLLKKKTVTEASLSFTFTRRAMVVGGLQGAIGALLVGRMGWISVAENEKYNLLSESN
RVNLTLIPPRRGWIIDRNGRPLANNRTDFRVDLIPERVTDAENTIRSLAHLLALGDDEVE
RIREELDKSAGFRPVQVAEKLTYDQFAAVSVRLPDLPGVAPSQGFSRNYPAGATVGHLLG
YVGAASAKDYEERKDPLLITPGFKVGKDGLERSFDRELTGKPGAKRVEVTARGKIVRELT
TRPDTPGNAIKLTIDAGLQEYAGRRLATQSGSVVVIDCHNGDVLTMASMPSFDPNSFSDG
ISHLEWDMLSKDDHVPLRNKTLQGLYPPGSTVKPMVALALLEAGVSPMETVSCAGAIRVG
NTLFHCHKRRGHGSLNMRGAIAQSCDIYFYQMAQRIGMDRIASMARRVGMGQKFALPFPS
QSFGTVPDPAWKLKKYNQKWQVYDTVNATIGQGYMLINPLQMAVMAARLATGRQLMPNFI
FGAQRPAPASVGVNEEHLVTIRDAMSAVVNGGGTGGAARIPLPGVMMAGKTGTAQVRRIT
MAERGGGVRSNASLPFKLRDHALFQGFAPFDNPRYAIACIIEHGGHVNRIEDAPMIAADT
MTYLFDQAKAMEKLETIEKDWGGPPAERMARQMAAYRLAKAIEKGEVPPPEAANAMNAAE
GNSATAATAAATAPAPEADDAPPPADSAP
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgcccctgctcaagaagaagaccgtcaccgaagcatccctgtccttcaccttc
acgcgccgggcaatggtggtgggcgggttgcagggggcgatcggggcgctgctggtcggg
cggatgggctggatcagcgtggcggagaatgagaaatacaacctcctgtcggaaagcaat
cgggtcaatctgacgctgattccgccgcggcgggggtggatcatcgaccgcaacgggcgg
ccgctggcgaacaaccgcaccgatttccgcgtcgacctgatcccggagcgggtgacggat
gcggaaaataccatccgcagcctggcccatctgctggcgctgggcgatgacgaggtggag
cggatcagggaggagctggacaagtcggcgggatttcgcccggtgcaggtggcggagaag
ctgacctacgaccaatttgcggcggtgagcgtgcggctgcccgacctgccgggcgtggcg
cccagccagggcttttcgcgcaactatcccgccggggcgacggtcgggcatctgctgggc
tatgtcggcgcggcgtcggccaaggattatgaggagcggaaagacccgctgctgatcacg
cccggcttcaaggtcggcaaggacgggctggagcggtccttcgacagggaacttaccggc
aagccgggcgcgaagcgcgtggaggtgacggcgcggggcaagatcgtgcgggaactcacc
acccggcccgacacgccgggcaatgcgatcaagctgaccatcgacgcgggccttcaggaa
tatgccgggcggcggctggcgacgcagagcgggtcggtggtggtgatcgactgccataat
ggcgatgtgctgaccatggcgtcgatgcccagtttcgatcccaacagcttttccgacggc
atcagtcatctggaatgggacatgctgtcgaaggacgaccatgtgccgttgcgcaacaag
acgttgcaggggctttacccgccgggttcgacggtgaagccgatggtggcgctcgccctg
ctggaggcgggcgtatcgccgatggagacggtgagctgcgcgggcgcgatccgggtcggc
aatacgctgttccactgccacaagcggcgcggccatggctcgctcaacatgcgcggcgcc
atcgcgcagagttgcgacatctatttctaccagatggcgcagcggatcggcatggatcgc
atcgccagcatggcccggcgcgtgggcatgggacagaaattcgccctgcccttccccagc
cagagtttcggcacggtgccggacccggcgtggaagctgaagaaatacaaccagaaatgg
caggtctacgacacggtcaacgcgaccattggtcagggctatatgctcatcaacccgttg
cagatggcggtgatggcggcgcggctggcgactggccggcagttgatgcccaacttcatc
ttcggcgcgcagcgacccgcgcctgcatccgtgggcgtgaatgaggagcatctggtgacc
atccgcgacgccatgagcgcggtggtgaacggcggcggcacgggcggcgcggcgcgcatc
ccgctgcccggcgtgatgatggcgggcaagaccggcacggcgcaggttcgccgcatcacc
atggcggagcgcggcggcggcgtgcgcagcaacgcatccctgcccttcaagctgcgcgac
cacgcgctgttccagggtttcgcgccgttcgacaatccgcgctatgccattgcctgcatc
attgagcatggcggccacgtgaaccggatcgaggacgcgccgatgatcgcggcggacacc
atgacctatctgttcgaccaggccaaggcgatggagaagctggagaccatcgaaaaggac
tggggcggcccgcccgccgaacggatggcgcggcagatggcggcctacaggctggcaaag
gccatagagaagggtgaagtcccgccgcccgaagccgccaatgcgatgaacgcggccgag
ggcaatagcgcgaccgcggcgaccgccgccgccacggcgccggctccggaagcggatgac
gcccctcctccggcggacagcgcgccatga
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