Sphingobium indicum UT26S: SJA_C1-18920
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Entry
SJA_C1-18920 CDS
T01201
Name
(GenBank) TonB-dependent receptor-like protein
KO
K02014
iron complex outermembrane recepter protein
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjp02000
]
SJA_C1-18920
Transporters [BR:
sjp02000
]
Other transporters
Pores ion channels [TC:
1
]
SJA_C1-18920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
BAI96726
UniProt:
D4Z294
LinkDB
All DBs
Position
1:complement(1900344..1902332)
Genome browser
AA seq
662 aa
AA seq
DB search
MRHHFLMGAAVAALLPAVAKAEDAPASQSDIVVTASPYAISRDETPTIVAKVDREKILRS
GGASITDALADVPGIAATGFAAGASRPIIRGMDATRVRILEDGSSSSDVSDIGPDHGIPI
DPLSAQSIEVVRGAATLRYGSQAIGGVVNVLNNRVPMTLPSQPLSGELTGSYDSVADTGQ
GSALMDGRAGNLAVHADGFYRNAGDYDIPHGTQQNSFFRGYGETAGASYFFGPSSDSHVG
VAIMQYDAKYGIPSDSTYIDMRQTKVLTRSSFDVGSGLVRTLNIDGSYADYTHDEDEPDG
TIDTTFRNKEYDGHAELLLGPLGPLRNTAIGVEIQHRKFSAIGEDSSYLFPTLTQSEAGY
LFTELPLGDSLHLQASGRIEHVHVTGTPRSDIFTKTDYTPVSGAIGALFDASKAVKFGLT
FSSTGRAPAMTELFARGGHDGPDTYETGDPNLRIERANSLEGTVRVNTGGLKFEGSAYST
WFHNYIYGDLTGRSCDDDGVCVDGLDEELKELNYRQQDAHFWGFEGEATYNVLKAAGGTL
QARLLGDYTRAKLDDGGNVPRIPPYRYGGGLTWTAGQFDAGFLLLHAGRQNRFGAFDTPT
PGYNELNAHVAVHPLKAYPGVELAVVGQNLTNDVQRDAAALNKADVVMPGRNIRLVLKVA
TF
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgcgacatcattttttgatgggcgcggctgttgccgcgctcctgcccgccgttgcgaag
gccgaagatgcgcccgcttcgcagtccgacatcgtggtgaccgcttcaccctatgccatc
agccgggacgagacgccgacgatcgtcgccaaggtcgatcgggagaaaattctccgctcc
ggcggcgccagcatcaccgacgcgcttgcggacgtgcccggcatcgcagcgaccggtttt
gccgccggggcgagccggcctatcattcgcggcatggacgcgacgcgcgtgcgcattctc
gaggacggcagcagcagttcggacgtctcggatatcggtccggatcacggcattccgatc
gaccccctttcggcgcagagcatcgaggtcgtgcgcggcgcggccacgttgcgatatggc
agccaggcgatcggcggtgtagtcaatgtgctcaacaaccgcgtgccgatgacgctgcca
agccagccgctctccggcgagctgacgggaagctatgattccgtcgccgacacaggccaa
ggatcagcgctgatggatggaagggcgggcaacctcgccgttcatgcggacggcttttat
cgaaacgccggggactacgacatcccgcacggaacacagcagaacagcttcttccgtggc
tacggtgaaaccgccggtgcttcatatttcttcggtcccagctcggacagtcatgtcggc
gtggcgatcatgcaatatgacgccaaatacggcatccccagcgacagcacctatatcgac
atgcgtcagaccaaggtgctgacgcggtcctctttcgatgtcggctcgggtcttgttcgg
acgctcaacatcgacggcagctatgccgactacacccatgacgaggacgaaccggacggc
acgatcgataccaccttccgcaacaaggaatatgatggccacgccgaattgctgctcggt
ccgcttggtccgcttcggaatacggcgatcggtgtagagatccagcatcgaaagttctcg
gcgatcggcgaggacagcagctatctcttcccgacgctgacgcagagcgaggcaggctat
ctgttcaccgaactgccgcttggcgatagccttcaccttcaggccagcggccggatcgaa
cacgtccatgtcaccggaacaccgcgttcggatatcttcacgaagacagattatacgccg
gtgagcggcgcgatcggcgcgttgttcgatgcgagcaaggccgtgaagttcggcctgacc
ttctcgagcaccggccgagcgccggcgatgaccgagctgttcgcgcgtggtggccatgat
ggtcccgacacctatgaaacaggcgatccgaacctcaggatcgagcgggccaattcgctc
gagggaaccgttcgcgtgaataccggcggcctcaagttcgagggcagcgcctatagcaca
tggttccacaattatatctatggggatctcaccgggcgaagctgcgatgacgacggagtc
tgcgtggacgggctcgacgaagagttgaaggaactcaactatcgccagcaggacgcccat
ttctggggcttcgaaggagaagccacctataatgtcctgaaggccgcgggcggaactctc
caggcccggctgctcggcgactatactcgggcaaagctcgacgacggtggaaatgtgccg
cgcatcccgccctatcggtacggcggcggactgacctggacggccggccaattcgatgcc
ggcttcctgctcctgcatgccggccgacagaaccgctttggtgcattcgacacgcccacc
ccgggctataacgagctcaacgcgcatgtcgcggtccacccgctcaaggcctatccgggg
gtcgaactggcggttgtgggacagaatctcaccaacgatgttcagcgcgacgcggccgcg
ctcaacaaggccgatgtcgtcatgcccggacgaaacatccggcttgtgctcaaggtcgcg
acgttctga
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