Sphingobium indicum UT26S: SJA_C1-19420
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Entry
SJA_C1-19420 CDS
T01201
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma-32 factor
KO
K03089
RNA polymerase sigma-32 factor
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sjp03021
]
SJA_C1-19420 (rpoH)
Transcription machinery [BR:
sjp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SJA_C1-19420 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r1_2
ARA70
HTH_11
Motif
Other DBs
NCBI-ProteinID:
BAI96776
UniProt:
D4Z2E4
LinkDB
All DBs
Position
1:1949196..1950110
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AA seq
304 aa
AA seq
DB search
MADKSNVPAVPALGGEASLNRYLSEIRKFPILTPEQEYMLAKRYAEHQDSEAAAQLVTSH
LRLVAKIAMGYRGYGLPVSELISEGNIGLMQGVKKFEPDRGFRLATYAMWWIRASIQEFI
LRSWSLVKMGTTAAQKKLFFNLRRMKNNIEAFEDGDLHPDDVKKIATDLGVTEEDVISMN
RRMAMGGDTSLNVPMREDGEGQWQDWLADSDPLQDERVADRQESELRHDMLVEAMDDLND
REKHILAERRLAEEPKTLEELSQVYGVSRERVRQIEVRAFEKLQKAMMRIAGDRLGKISR
LAAV
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaagagcaatgtccccgcggttccggcgctgggcggtgaagccagcctcaac
cgctatctgtcggaaatccgcaaatttccgattttgacgcccgagcaggaatatatgctc
gcgaagcgctatgccgaacatcaggattcggaagccgcggcgcagctcgtgacctcgcac
ctgcgactggtcgcgaagatcgccatgggctatcgcggctatggcctgccggtcagcgag
ctgatcagcgaaggcaatatcggcctgatgcagggcgtcaagaagttcgagccggatcgc
ggcttccgtctggcgacctatgcgatgtggtggattcgcgcctctatccaggaattcatc
ctgcggtcgtggagccttgtgaagatgggcaccaccgccgcgcagaaaaagctgttcttc
aacctgcgccggatgaagaacaatatcgaagccttcgaggatggcgacctgcaccccgac
gacgtcaagaagatcgccaccgatctgggcgtcacggaggaggacgtgatatccatgaac
cgccgcatggcgatgggcggcgacacgtcgctcaacgtgccgatgcgcgaggatggcgag
ggccagtggcaggattggctggccgatagcgatccattgcaggacgaacgcgtcgccgac
cgacaggaaagcgaactgcgccacgacatgctggtggaggcgatggacgacctcaacgat
cgcgagaagcatatcctggcggaacgccgcctggcggaagaacccaagacgctggaggaa
ctctcgcaggtctatggcgtcagccgcgaacgcgtccgtcagatcgaggtccgcgccttc
gagaagctgcaaaaggcgatgatgcggattgcgggcgacaggctgggcaagatttcccgc
ctcgccgccgtctga
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