Sphingobium indicum UT26S: SJA_C1-20800
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Entry
SJA_C1-20800 CDS
T01201
Symbol
fadB
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp00071
Fatty acid degradation
sjp00280
Valine, leucine and isoleucine degradation
sjp00310
Lysine degradation
sjp00362
Benzoate degradation
sjp00380
Tryptophan metabolism
sjp00410
beta-Alanine metabolism
sjp00640
Propanoate metabolism
sjp00650
Butanoate metabolism
sjp00907
Pinene, camphor and geraniol degradation
sjp00930
Caprolactam degradation
sjp01100
Metabolic pathways
sjp01110
Biosynthesis of secondary metabolites
sjp01120
Microbial metabolism in diverse environments
sjp01200
Carbon metabolism
sjp01212
Fatty acid metabolism
Module
sjp_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SJA_C1-20800 (fadB)
00650 Butanoate metabolism
SJA_C1-20800 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
SJA_C1-20800 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SJA_C1-20800 (fadB)
00310 Lysine degradation
SJA_C1-20800 (fadB)
00380 Tryptophan metabolism
SJA_C1-20800 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SJA_C1-20800 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SJA_C1-20800 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SJA_C1-20800 (fadB)
00930 Caprolactam degradation
SJA_C1-20800 (fadB)
Enzymes [BR:
sjp01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SJA_C1-20800 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SJA_C1-20800 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SJA_C1-20800 (fadB)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
F420_oxidored
2-Hacid_dh_C
Pyr_redox_2
DAO
UDPG_MGDP_dh_N
XdhC_C
Sacchrp_dh_NADP
AlaDh_PNT_C
NAD_binding_8
Shikimate_DH
LSDAT_euk
Motif
Other DBs
NCBI-ProteinID:
BAI96914
UniProt:
D4Z2T2
LinkDB
All DBs
Position
1:2073446..2075623
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AA seq
725 aa
AA seq
DB search
MQSINFDIDRDGIATLTIDVPGQSMNVIGPDFMADLDAAITRIASEEAIRGAVIASGKDS
GFMAGMDLKYFGSMLGGESGKRPSPAAIFDKVFVLNQLLRRLETCGKPVACAIEGTCVGG
GFELALACHRRVVGDSPKTQLGLPEILIGLFPGGGGSQRLPRIMGVQASLMYMLQGKLFR
PAEAAMMKVVDEVVPQGMAVEKAKDCVKANPNASVQPWDVKGFKVPGGAGGFNPGFAQTM
AGALPMTLKQTQRNMNAPIALLSAVYEGITLPMDRAVRIESKYFAKVAADPQAANMVRSL
FVNKQAAERGARRPKDQPKAPTKKLAMLGAGMMGAGIATVAAQAGMEVVLFDRDQAYAEK
GKAHVEEVLKKRLGKGLTPEKMAETLARVTPTTDYAALAGADFVIEAVFEDVAIKAEVTK
KVEEVLGADIIFGSNTSTLPITKLARAWSKPENFIGVHFFSPVEKMPLVEIILGKETGPA
AIAKALDFVSQIRKTPIVVNDARGFYTSRCFATYVQEGVEMVAEGINPALIENAGRQLGM
PVGPLAVGDEVSLELAHKIIVAARKELGDAYVAQPSDAVMERMVGLGRLGRKSAKGWYDY
PEGGKKHLWPGLAEMFPPAAVQPGVEAVKERLLYRQLIECARCFEEGVLETPEDGDIGAI
FGWGFAPYTGGPFSHMDTVGIAAVVAVLDRLAAAHGGRFAPTAQLREMAASGATFYRPVS
SRAAA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcatcaatttcgacatcgaccgcgacggcatcgccacgctgaccatcgacgtt
cccggccagtccatgaacgtcatcgggccggatttcatggccgatctggacgcggcgatc
acgcgcatcgcttccgaggaggcgatcaggggcgcggtgatcgcgtcgggcaaggacagc
gggttcatggcgggcatggacctgaaatatttcgggtcgatgctgggcggcgagagcggg
aagcgcccctcccccgccgcgatcttcgacaaggtcttcgtgctgaaccagttgctccgg
cggctggagacatgcggcaagccggtggcctgcgccatagagggcacctgcgtcggcggc
gggttcgaactggcgctggcctgtcaccgccgcgtggtgggcgacagcccgaagacgcag
cttggcctgccggaaatattgatcggcctgttccccggcggcggcgggtcgcagcgcctg
ccgcgcatcatgggcgtgcaggcgtcgctgatgtatatgttgcagggcaagctgttccgt
cccgccgaagcggcgatgatgaaggtcgtcgatgaggtcgtgccgcagggcatggcggtc
gaaaaggcgaaggactgtgtgaaggcgaaccccaacgcatcggtgcagccgtgggacgtc
aagggattcaaggtgccgggcggcgcgggcgggttcaaccccggcttcgcgcagaccatg
gcgggcgccctgccgatgacgctgaagcagacccagcgcaacatgaacgcgccgatcgcg
ctgctgtccgccgtctatgaaggcatcaccctgcccatggatcgcgccgtccggatcgag
agcaaatatttcgccaaggtcgcggccgacccgcaggcggcgaacatggtccgcagcctg
ttcgtcaacaagcaggcggccgagcgcggggcgcggcggcccaaggaccagcccaaggcg
ccgacgaagaagctggccatgctgggcgcgggcatgatgggcgcgggcatcgccaccgtc
gccgcgcaggcgggcatggaggtcgtgctgttcgaccgcgaccaggcctatgccgaaaag
ggcaaggcgcatgtcgaggaggtgctgaagaagcggctgggcaagggtctgacgccggag
aagatggcggagacgctggcccgcgtgacgccgaccaccgactatgcggcgctggccggg
gcggacttcgtgatcgaggcggtgttcgaggatgtcgccatcaaggcggaggtgacgaag
aaggtggaggaagtgctgggcgcggacatcatcttcgggtccaacacctccactttgccg
atcaccaagctggccagggcatggtcgaagccggagaatttcatcggcgtccatttcttc
tctccggtcgagaagatgccgctggtggagatcatcctgggcaaggaaaccggcccggcc
gccatcgccaaggcgctggatttcgtcagccagatccgcaagacgcccatcgtcgtcaat
gatgcgcgcggcttctacacctcgcgctgcttcgccacctatgtgcaggaaggcgtggag
atggtggcggaggggatcaacccggcgctgatcgaaaatgccgggcggcaactgggcatg
cccgtggggccgctggccgtgggggacgaggtttcgctggagctggcccacaagatcatc
gtcgcggcgcgcaaggaactgggcgacgcctatgtcgcgcagccgtccgacgcggtgatg
gaacggatggtcggactgggacggctgggccgcaagagcgccaagggctggtatgactat
cccgaaggcgggaagaagcatctgtggccgggcctggcggagatgttcccgcccgccgcc
gtgcagcccggcgtggaggcggttaaggagcggctgctctatcgccagttgatcgaatgc
gcccgctgttttgaagaaggcgtgctggagacgccggaggacggcgacatcggcgcgatc
ttcggctggggcttcgcgccctataccggcgggccgttcagccatatggatacggtcggc
atcgctgctgtcgtggcggtgctggaccggctggcggcggcgcatgggggacggttcgcc
cccaccgcgcagttgcgggagatggcggccagcggcgcgaccttctatcggcccgtttcg
tcccgcgccgccgcatga
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