Sphingobium indicum UT26S: SJA_C1-21140
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Entry
SJA_C1-21140 CDS
T01201
Symbol
tfdR
Name
(GenBank) LysR-family transcriptional regulator
KO
K21757
LysR family transcriptional regulator, benzoate and cis,cis-muconate-responsive activator of ben and cat genes
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sjp03000
]
SJA_C1-21140 (tfdR)
Transcription factors [BR:
sjp03000
]
Prokaryotic type
Helix-turn-helix
LysR family
SJA_C1-21140 (tfdR)
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
DNA_processg_A
Motif
Other DBs
NCBI-ProteinID:
BAI96948
UniProt:
D4Z2W6
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All DBs
Position
1:2111803..2112675
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AA seq
290 aa
AA seq
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MEFRQLRYFVAAAEYGNIGTAAQRLNVSQPPVSRQIQALEDELGVQLLVRTTKGVSLTAA
GRSFLEDARVILTRSRDSRDRCRAAGRGDVGRLAIGYLGSVIYQVLPALLRDFRREVPEA
DISLAQLSKHDMVQALRDGVIHVGFGRYFPGEPDIIFEKIQDEPLYVATADERAGAPDRP
VALASYKDRPFVLFPKGDRPSFADEIIALLKARGIQPRIEHFAEDATAALALTAMGAGVC
VVPASLAAIHWPGVRFTPLLDDAVGSPIVCAYAQHCDEPILHRFLGAIRR
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaatttcgtcagcttcgctacttcgtcgcggcggcggaatatggcaatatcggcacg
gcggcgcagcggctgaacgtgtcccagccgcccgtgagccgacagatccaggcactggaa
gacgagcttggcgtgcagttgctggtccggacgaccaagggggtcagcctgaccgcggcg
ggacggagcttcctggaagacgccagggtcatcctgacgcgaagccgggattcgcgcgac
cgctgccgcgccgcggggcgaggcgatgtgggccgcctggccatcggctatctcggctct
gtcatctaccaggttctccccgcgctgctccgggatttccgccgcgaggttcccgaagcg
gacatttccctcgcccagctcagcaagcacgacatggtccaggcgctgcgcgacggggtg
atccatgtcgggttcgggcgctattttccgggcgaaccggacatcatattcgaaaagatc
caggacgagccgctctatgtcgcgaccgccgacgagcgggccggagcgcccgaccggcca
gtcgcgctggcgagctacaaggatcggcccttcgtgctgttccccaagggcgaccggccc
agcttcgccgacgaaatcatcgcgctgctcaaggcgcggggcattcagccgcgcatcgag
catttcgccgaagacgcgaccgccgccctggcgctgaccgcgatgggcgcgggagtctgc
gtggtgcccgcatcgctcgcggccatccattggcccggcgtccgcttcacgcccctgctc
gacgatgcggtcggttccccgatcgtttgcgcctatgcccagcattgcgacgaaccgatc
ctgcatcgtttcctgggcgcgatccggcgctga
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