Sphingobium indicum UT26S: SJA_C1-21540
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Entry
SJA_C1-21540 CDS
T01201
Symbol
rpsA
Name
(GenBank) ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
sjp
Sphingobium indicum UT26S
Pathway
sjp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SJA_C1-21540 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
sjp03011
]
SJA_C1-21540 (rpsA)
Ribosome [BR:
sjp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SJA_C1-21540 (rpsA)
Bacteria
SJA_C1-21540 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
SH3_16
CsrA
Motif
Other DBs
NCBI-ProteinID:
BAI96988
UniProt:
D4Z306
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All DBs
Position
1:2155001..2156713
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AA seq
570 aa
AA seq
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MASTAFPSRDDFAALLNDSLGGEDGGFEGRVVKGTVTGIENDMALIDVGLKSEGRVPLRE
FAAPGQKAELKVGDEVEVYVDRVENAHGEAMLSRDRARREAAWDKLESEFTENARVEGVI
FGRVKGGFTVDLDGAVAFLPGSQVDIRPVRDVTPLMDIPQPFQILKMDRRRGNIVVSRRA
ILEETRAEQRSGLIQTLAEGQIIEGVVKNITDYGAFVDLGGIDGLLHVTDLSYKRINHPN
EMINIGDTVRVQIIRINRDTQRISLGMKQLESDPWEGASAKYPVGAKLSGRVTNITEYGA
FVELEPGIEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVIVLEVDPEKRRISLGLKQAQNN
PWDSFAERHPIGSTVEGEVKNATEFGLFIGLDGDVDGMVHMSDIAWGISGEDALALHRKG
ETVQAVVLDIDVEKERISLGMKQLERGGPAAGGTTAAAAGLNKNQTVTVTVLEVRDGGLE
VQAGEDGATGFIKRSDLGRDRDEQRPERFQIGQKFDAMVTGFDRAKKPTFSVKALQIAEE
KQAVAQYGSSDSGASLGDILGEALKAKSEG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcctctacggcattcccttcgcgcgacgatttcgccgcgcttctcaatgattctctc
ggtggcgaggatggcggcttcgaaggccgcgtcgtcaagggcaccgttaccggcatcgaa
aacgacatggcgctgatcgacgtcggcctgaagtcggaaggccgcgtgccgctgcgcgaa
ttcgccgcgcccggccagaaggccgaattgaaggtcggcgacgaagtcgaagtctatgtc
gaccgcgtcgaaaacgcccatggcgaagccatgctgtcccgcgaccgcgcccgccgcgaa
gccgcctgggacaagctggaatccgaattcaccgaaaacgcccgcgtcgaaggcgtcatc
ttcggccgcgtcaagggcggcttcaccgtcgacctggacggcgcggtggcgttcctgccc
ggctcgcaggtcgatattcgtccggttcgcgacgtcacgccgctgatggacattccgcag
cccttccagatcctgaagatggatcgccgccgcggcaacatcgtcgtgtcgcgccgcgcc
atcctggaagaaacccgcgccgaacagcgcagcggcctcatccagacgctggccgagggc
cagatcatcgagggcgtggtcaagaacatcaccgattacggcgcgttcgtcgacctgggc
ggcatcgacggcctgctgcacgtcaccgacctcagctacaagcgcatcaaccaccccaac
gagatgatcaacatcggcgacaccgtccgcgtccagatcatccgcatcaaccgcgacacc
cagcgcatcagcctgggcatgaagcagttggaaagcgatccgtgggaaggcgcttcggcc
aagtaccccgtcggcgccaagctgtcgggccgcgtcacgaacatcaccgaatatggtgcg
ttcgtcgagctggagccgggcatcgaaggcctggtccacgtttcggaaatgtcctggacc
aagaagaacgtccaccccggcaagatcgtttcgaccagccaggaagtcgacgtcatcgtc
ctggaagtcgatcccgaaaagcgccgcatctcgctcggcctcaagcaggcccagaacaat
ccctgggacagcttcgccgaacgtcacccgatcggctcgaccgtcgagggcgaagtcaag
aacgcgaccgaattcggcctgttcatcgggctggacggcgacgtcgacggcatggtccac
atgtcggacatcgcctggggcatttcgggcgaggacgcgctggcgctgcaccgcaagggc
gagactgttcaggccgtcgttctggacatcgacgtcgagaaggagcgcatcagcctgggc
atgaagcagcttgagcgcggcggccccgccgctggcggcaccaccgccgctgccgccggc
ctcaacaagaaccagacggtcaccgtcacggttctggaagtccgcgacggcggcctggaa
gtccaagccggcgaagacggcgccaccggcttcatcaagcgcagcgacctgggccgcgac
cgcgacgagcagcgtccggaacgcttccagatcggtcagaagttcgacgccatggtcacg
ggtttcgaccgcgccaagaagccgaccttctcggtcaaggccctgcagatcgccgaagaa
aagcaggccgtggcgcagtacggatcgtccgacagcggcgcgtcgctgggcgacatcctg
ggcgaagcgctcaaggccaagagcgagggctaa
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