Sphingobium indicum UT26S: SJA_C1-22320
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Entry
SJA_C1-22320 CDS
T01201
Name
(GenBank) OmpA-family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
sjp
Sphingobium indicum UT26S
Brite
KEGG Orthology (KO) [BR:
sjp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sjp02000
]
SJA_C1-22320
Transporters [BR:
sjp02000
]
Other transporters
Pores ion channels [TC:
1
]
SJA_C1-22320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
ToxB_N
Motif
Other DBs
NCBI-ProteinID:
BAI97066
UniProt:
D4Z384
LinkDB
All DBs
Position
1:complement(2242627..2243337)
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AA seq
236 aa
AA seq
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MNMRNAVGKAAAAGVATVMLTTAAWAAPASPLLQLGKSELRDALTSRYDTAVKAVGDASV
RAAQDSRWTYAVEAKNQCGIAIGFIKSGTKDADSINKCDDFVARLSAPPPPPVSAAPAPP
ALDCTAPAVSIFFDWNMDTPLPEGAGTISTLTQTAAQCGWTRFGVTGYTDTSGSNRYNDG
LSLRRARNVASLMSQGGVSADAITVTGLGETQLKIETADGVREPMNRRVEITASAN
NT seq
711 nt
NT seq
+upstream
nt +downstream
nt
gtgaatatgcgaaatgcagttggaaaggctgcggccgccggggtggcgaccgtcatgctg
acgacagcggcctgggcggcgcctgcctcgcccttgctgcaactgggcaagtccgaattg
cgggacgcgctgaccagccggtacgacacggcggtcaaggccgttggcgacgccagcgtg
cgcgccgcgcaggacagccgctggacctacgcggtcgaagcgaagaaccagtgcggcatc
gccatcggtttcatcaaatccggcacgaaggatgcggacagcatcaacaagtgcgacgac
tttgtggcccgcctttcggcgccgccaccgccgccggtgtcggcagccccagccccaccc
gcgctggactgcacggcgccggcggtgtcaatcttcttcgactggaacatggacaccccg
cttcccgaaggcgcgggcaccatctccacgctgacgcagacggcggcgcaatgcggttgg
acccgcttcggcgtcaccggctataccgacacgtcgggcagcaaccgctataatgacggc
ctgtcgctgcgccgggcgcgcaatgtcgccagcctgatgagccagggcggcgtgtccgcc
gacgccatcaccgtcaccggcctgggcgaaacccaattgaagatcgaaaccgccgatggt
gtgcgcgaaccgatgaaccgtcgggtcgaaatcaccgccagcgcgaattaa
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